RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CLN5O75503 358 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 NDUFA3O95167 84 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 MT-CO2P00403 227 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BJP06899 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 AREGP15514 252 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BOP23527 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BBP33778 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 CEBPGP53567 150 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 FAM3BP58499 235 aaPredicted RBP7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BDP58876 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BCP62807 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 RPL23P62829 140 aaKnown RBP7.05□□□□□ -1.28
PHGDH-219ENST00000641513 WT1-ASQ06250 92 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 FXYD3Q14802 87 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST2H2BEQ16778 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 C5orf64Q2M2E5 130 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 ZNF674Q2M3X9 581 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 FBLN7Q53RD9 439 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.05□□□□□ -1.28
PHGDH-219ENST00000641513 NPBQ8NG41 125 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 OR51G1Q8NGK1 321 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BHQ93079 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 C11orf52Q96A22 123 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 MISP3Q96FF7 219 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 C1orf159Q96HA4 380 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 AJUBAQ96IF1 538 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 SLC35E1Q96K37 410 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 OR5B12Q96R08 314 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BNQ99877 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 HIST1H2BMQ99879 126 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 RASL11BQ9BPW5 248 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 PARLQ9H300 379 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 OR51M1Q9H341 326 aa7.05□□□□□ -1.28
PHGDH-219ENST00000641513 A0A096LNT2 108 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 IGLC7A0M8Q6 106 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 C11orf94C9JXX5 98 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 J3QLI3 93 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 YIF1AO95070 293 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 IGHV4-31P0DP07 118 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 S100A2P29034 98 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 RHOBP62745 196 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PRR20EP86478 221 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PRR20CP86479 221 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PRR20DP86480 221 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PRR20BP86481 221 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PRR20AP86496 221 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 EBI3Q14213 229 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 KCNIP4Q6PIL6 250 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 TEPPQ6URK8 271 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PRSS57Q6UWY2 283 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 SLC16A13Q7RTY0 426 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 Q8N6K4 173 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 TMEM190Q8WZ59 177 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 ACY3Q96HD9 319 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 RNF2Q99496 336 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 MGST2Q99735 147 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 FAM103A1Q9BTL3 118 aaKnown RBP7.04□□□□□ -1.28
PHGDH-219ENST00000641513 GAR1Q9NY12 217 aaKnown RBP7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PITPNC1Q9UKF7 332 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 PXMP4Q9Y6I8 212 aa7.04□□□□□ -1.28
PHGDH-219ENST00000641513 TEX15Q9BXT5 2789 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 USP9YO00507 2555 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-219ENST00000641513 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 TEX22C9J3V5 150 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 C9JCJ5 164 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 SMAD7O15105 426 aaKnown RBP7.03□□□□□ -1.28
PHGDH-219ENST00000641513 PAGE4O60829 102 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 AVPP01185 164 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 DEFA4P12838 97 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 CD69Q07108 199 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 ADIRFQ15847 76 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 LY6EQ16553 131 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 MLANAQ16655 118 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 ARSJQ5FYB0 599 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-219ENST00000641513 CYB5R2Q6BCY4 276 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 ZNF343Q6P1L6 599 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 SPNS3Q6ZMD2 512 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 C16orf82Q7Z2V1 217 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 TMEM219Q86XT9 240 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 OR4F5Q8NH21 305 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 RNASEH2CQ8TDP1 164 aaKnown RBP7.03□□□□□ -1.28
PHGDH-219ENST00000641513 CACNG8Q8WXS5 425 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 C22orf15Q8WYQ4 148 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 ARPC1AQ92747 370 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 OR4F4Q96R69 305 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 SLC25A33Q9BSK2 321 aa7.03□□□□□ -1.28
PHGDH-219ENST00000641513 SOX21Q9Y651 276 aaPredicted RBP7.03□□□□□ -1.28
PHGDH-219ENST00000641513 FBN2P35556 2912 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 CELSR2Q9HCU4 2923 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 IGHV3-21A0A0B4J1V1 117 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 H3BUX3 64 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 IGHV3-48P01763 117 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 TRGC2P03986 189 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 GPX4P36969 197 aaPredicted RBP7.02□□□□□ -1.29
PHGDH-219ENST00000641513 GALR1P47211 349 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 CX3CL1P78423 397 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 SSBP2P81877 361 aaPredicted RBP7.02□□□□□ -1.29
PHGDH-219ENST00000641513 FOXL1Q12952 345 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 GAMTQ14353 236 aa7.02□□□□□ -1.29
PHGDH-219ENST00000641513 KLF17Q5JT82 389 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms