RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 A0A1W2PRM7 423 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 LY6LH3BQJ8 138 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 M0R1W7 72 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 OR10J4P0C629 311 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 S100A2P29034 98 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 COMPP49747 757 aaPredicted RBP12.05□□□□□ -0.48
TRIM3-215ENST00000639856 GFI1BQ5VTD9 330 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 ETFRF1Q6IPR1 90 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 PPP1R27Q86WC6 154 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 BTF3L4Q96K17 158 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 FAM167A-AS1Q96KT0 104 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 PFDN5Q99471 154 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 CRYGCP07315 174 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 LMO4P61968 165 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 ZNF90Q03938 601 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 OR1L4Q8NGR5 311 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 PITPNC1Q9UKF7 332 aa12.05□□□□□ -0.48
TRIM3-215ENST00000639856 A0A1W2PRE2 83 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 A1L4Q6 167 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 GGTLC3B5MD39 225 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 K7EN84 100 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 COX7A2P2O60397 106 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 GOSR1O95249 250 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 HNF1AP20823 631 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 CRYBB3P26998 211 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 LHFPL4Q7Z7J7 247 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 OR11H6Q8NGC7 330 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 OR10G8Q8NGN5 311 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 NRGNQ92686 78 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 EAF1Q96JC9 268 aaPredicted RBP12.04□□□□□ -0.48
TRIM3-215ENST00000639856 SLC25A2Q9BXI2 301 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 GPR61Q9BZJ8 451 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 HELTA6NFD8 242 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 PRTN3P24158 256 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 MFAP2P55001 183 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 PAX2Q02962 417 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 ACTL10Q5JWF8 245 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 C10orf113Q5VZT2 155 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 VMO1Q7Z5L0 202 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 SGMS2Q8NHU3 365 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 MISP3Q96FF7 219 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 RNF5Q99942 180 aa12.04□□□□□ -0.48
TRIM3-215ENST00000639856 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 SVEP1Q4LDE5 3571 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 TRAV5A0A0B4J249 113 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 BPIFB3P59826 476 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 SUMO1P63165 101 aaKnown RBP12.03□□□□□ -0.48
TRIM3-215ENST00000639856 PDZD11Q5EBL8 140 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 PATE2Q6UY27 113 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 OR5AU1Q8NGC0 362 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 OR1P1Q8NH06 330 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 ZNF355PQ9NSJ1 428 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 HILPDAQ9Y5L2 63 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 CELSR2Q9HCU4 2923 aa12.03□□□□□ -0.48
TRIM3-215ENST00000639856 ODF3BA8MYP8 253 aa12.02□□□□□ -0.48
TRIM3-215ENST00000639856 LINC00587B1AMM8 73 aa12.02□□□□□ -0.48
TRIM3-215ENST00000639856 CORTO00230 105 aa12.02□□□□□ -0.48
TRIM3-215ENST00000639856 UBE2L3P68036 154 aaKnown RBP12.02□□□□□ -0.48
TRIM3-215ENST00000639856 TPTE2P1Q5T6R2 138 aa12.02□□□□□ -0.48
TRIM3-215ENST00000639856 FBXL15Q9H469 300 aa12.02□□□□□ -0.48
TRIM3-215ENST00000639856 A0A0U1RQK1 487 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 ZNF320A2RRD8 509 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 TEX22C9J3V5 150 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 APELAP0DMC3 54 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 HTR1DP28221 377 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 GNG4P50150 75 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 PDLIM4P50479 330 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 TMEM116Q8NCL8 245 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 LPAR2Q9HBW0 351 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 TNFRSF19Q9NS68 423 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 POLQO75417 2590 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 FBN2P35556 2912 aa12.02□□□□□ -0.49
TRIM3-215ENST00000639856 IGHV2-70DA0A0C4DH43 119 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 TIMM23O14925 209 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 HOXB4P17483 251 aaPredicted RBP12.01□□□□□ -0.49
TRIM3-215ENST00000639856 CENPWQ5EE01 88 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 RUSC1-AS1Q66K80 236 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 OR10D4PQ8NGN7 298 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 TRGV9Q99603 122 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 SIRPDQ9H106 197 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 DPM3Q9P2X0 92 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 F11RQ9Y624 299 aaKnown RBP12.01□□□□□ -0.49
TRIM3-215ENST00000639856 PYY3Q5JQD4 70 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 COA6Q5JTJ3 125 aaKnown RBP12.01□□□□□ -0.49
TRIM3-215ENST00000639856 C19orf35Q6ZS72 473 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 TMEM183AQ8IXX5 376 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 SRSF12Q8WXF0 261 aaKnown RBP12.01□□□□□ -0.49
TRIM3-215ENST00000639856 PAXXQ9BUH6 204 aa12.01□□□□□ -0.49
TRIM3-215ENST00000639856 USP9YO00507 2555 aaPredicted RBP12□□□□□ -0.49
TRIM3-215ENST00000639856 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 MOSP00540 346 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 PYYP10082 97 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 ATP5J2P56134 94 aa12□□□□□ -0.49
TRIM3-215ENST00000639856 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
TRIM3-215ENST00000639856 FBLN7Q53RD9 439 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms