RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 TCTAP57738 103 aa15.2■□□□□ 0.02
CHD9-208ENST00000563410 C2orf83Q53S99 150 aa15.2■□□□□ 0.02
CHD9-208ENST00000563410 TMEM41BQ5BJD5 291 aa15.2■□□□□ 0.02
CHD9-208ENST00000563410 SELENOHQ8IZQ5 122 aaKnown RBP15.2■□□□□ 0.02
CHD9-208ENST00000563410 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.2■□□□□ 0.02
CHD9-208ENST00000563410 PRSS54Q6PEW0 395 aa15.19■□□□□ 0.02
CHD9-208ENST00000563410 MORN3Q6PF18 240 aaPredicted RBP15.19■□□□□ 0.02
CHD9-208ENST00000563410 TMEM170AQ8WVE7 144 aa15.19■□□□□ 0.02
CHD9-208ENST00000563410 RBPMSQ93062 196 aaKnown RBP15.19■□□□□ 0.02
CHD9-208ENST00000563410 GPR146Q96CH1 333 aa15.19■□□□□ 0.02
CHD9-208ENST00000563410 NARS2Q96I59 477 aaKnown RBP15.19■□□□□ 0.02
CHD9-208ENST00000563410 NAA60Q9H7X0 242 aa15.19■□□□□ 0.02
CHD9-208ENST00000563410 X6R8D5 127 aa15.19■□□□□ 0.02
CHD9-208ENST00000563410 RPS10-NUDT3A0A1W2PQS6 291 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 C11orf94C9JXX5 98 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 MIFP14174 115 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 RND2P52198 227 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 SSBP1Q04837 148 aaKnown RBP15.18■□□□□ 0.02
CHD9-208ENST00000563410 GPR107Q5VW38 600 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 C16orf54Q6UWD8 224 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 CSNK1G2-AS1Q8NCQ2 148 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 OR1S2Q8NGQ3 325 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 GLMPQ8WWB7 406 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 HEYLQ9NQ87 328 aaPredicted RBP15.18■□□□□ 0.02
CHD9-208ENST00000563410 CACNG5Q9UF02 275 aa15.18■□□□□ 0.02
CHD9-208ENST00000563410 C14orf166Q9Y224 244 aaKnown RBP15.18■□□□□ 0.02
CHD9-208ENST00000563410 IGLL5B9A064 214 aa15.17■□□□□ 0.02
CHD9-208ENST00000563410 HNRNPCP07910 306 aaKnown RBP eCLIP15.17■□□□□ 0.022e-6■□□□□ 8.2
CHD9-208ENST00000563410 YPEL3P61236 119 aaPredicted RBP15.17■□□□□ 0.02
CHD9-208ENST00000563410 DHRS2Q13268 280 aa15.17■□□□□ 0.02
CHD9-208ENST00000563410 SURF2Q15527 256 aaPredicted RBP15.17■□□□□ 0.02
CHD9-208ENST00000563410 ACTL10Q5JWF8 245 aa15.17■□□□□ 0.02
CHD9-208ENST00000563410 RNASEH2CQ8TDP1 164 aaKnown RBP15.17■□□□□ 0.02
CHD9-208ENST00000563410 KRTAP17-1Q9BYP8 105 aa15.17■□□□□ 0.02
CHD9-208ENST00000563410 GPR132Q9UNW8 380 aa15.17■□□□□ 0.02
CHD9-208ENST00000563410 ELOA3CA0A087WX78 387 aaPredicted RBP15.16■□□□□ 0.02
CHD9-208ENST00000563410 CRYM-AS1A6NIL9 109 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 CTDSP2O14595 271 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 NXPH3O95157 252 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 SLC25A4P12235 298 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 HLA-DMBP28068 263 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 OR10J1P30954 320 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 DHODHQ02127 395 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 MEF2DQ14814 521 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 USF2Q15853 346 aaPredicted RBP15.16■□□□□ 0.02
CHD9-208ENST00000563410 SLC24A4Q8NFF2 622 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 Q8WTZ3 238 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 CLEC5AQ9NY25 188 aa15.16■□□□□ 0.02
CHD9-208ENST00000563410 HELTA6NFD8 242 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 MRPS10P82664 201 aaKnown RBP15.15■□□□□ 0.02
CHD9-208ENST00000563410 PSMG4Q5JS54 123 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 TMEM268Q5VZI3 342 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 Q6ZTC4 211 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 OR4C16Q8NGL9 310 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 SMIM4Q8WVI0 70 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 RAB40CQ96S21 281 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 TMEM56-RWDD3S4R434 201 aa15.15■□□□□ 0.02
CHD9-208ENST00000563410 CEBPZOSA8MTT3 80 aa15.14■□□□□ 0.01
CHD9-208ENST00000563410 DISC1C4P0D8 188 aa15.14■□□□□ 0.01
CHD9-208ENST00000563410 RGS5O15539 181 aa15.14■□□□□ 0.01
CHD9-208ENST00000563410 EIF2B2P49770 351 aaKnown RBP15.14■□□□□ 0.01
CHD9-208ENST00000563410 IL4P05112 153 aa15.13■□□□□ 0.01
CHD9-208ENST00000563410 AP2S1P53680 142 aaPredicted RBP15.13■□□□□ 0.01
CHD9-208ENST00000563410 SPCS2Q15005 226 aa15.13■□□□□ 0.01
CHD9-208ENST00000563410 NPIPB3Q92617 1050 aa15.13■□□□□ 0.01
CHD9-208ENST00000563410 TBC1D24Q9ULP9 559 aa15.13■□□□□ 0.01
CHD9-208ENST00000563410 FAM90A26D6RGX4 464 aa15.12■□□□□ 0.01
CHD9-208ENST00000563410 BUB3O43684 328 aa15.12■□□□□ 0.01
CHD9-208ENST00000563410 AKAIN1P0CW23 69 aa15.12■□□□□ 0.01
CHD9-208ENST00000563410 NPY1RP25929 384 aa15.12■□□□□ 0.01
CHD9-208ENST00000563410 NMSQ5H8A3 153 aa15.12■□□□□ 0.01
CHD9-208ENST00000563410 PRR13Q9NZ81 148 aa15.12■□□□□ 0.01
CHD9-208ENST00000563410 CELA1Q9UNI1 258 aa15.12■□□□□ 0.01
CHD9-208ENST00000563410 FAT2Q9NYQ8 4349 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 TRAV10A0A0B4J240 114 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 CTDSPLO15194 276 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 TOMM40O96008 361 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 ETFRF1Q6IPR1 90 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 OR51S1Q8NGJ8 323 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 ACY3Q96HD9 319 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 NRN1Q9NPD7 142 aa15.11■□□□□ 0.01
CHD9-208ENST00000563410 DNAH2Q9P225 4427 aa15.1■□□□□ 0.01
CHD9-208ENST00000563410 DNAH17Q9UFH2 4485 aa15.1■□□□□ 0.01
CHD9-208ENST00000563410 IGHV4-4A0A075B6R2 117 aa15.1■□□□□ 0.01
CHD9-208ENST00000563410 SULT1A3P0DMM9 295 aa15.1■□□□□ 0.01
CHD9-208ENST00000563410 SULT1A4P0DMN0 295 aa15.1■□□□□ 0.01
CHD9-208ENST00000563410 SIGLEC15Q6ZMC9 328 aa15.1■□□□□ 0.01
CHD9-208ENST00000563410 IL22RA2Q969J5 263 aa15.1■□□□□ 0.01
CHD9-208ENST00000563410 SEPSECSQ9HD40 501 aaKnown RBP15.1■□□□□ 0.01
CHD9-208ENST00000563410 H3BMM0 161 aa15.09■□□□□ 0.01
CHD9-208ENST00000563410 RD3LP0DJH9 198 aa15.09■□□□□ 0.01
CHD9-208ENST00000563410 PSG1P11464 419 aa15.09■□□□□ 0.01
CHD9-208ENST00000563410 ALDH3B2P48448 385 aa15.09■□□□□ 0.01
CHD9-208ENST00000563410 SNRPD3P62318 126 aaKnown RBP15.09■□□□□ 0.01
CHD9-208ENST00000563410 IL18Q14116 193 aa15.09■□□□□ 0.01
CHD9-208ENST00000563410 PRRT1Q99946 306 aa15.09■□□□□ 0.01
CHD9-208ENST00000563410 KIAA1109Q2LD37 5005 aa15.08■□□□□ 0
CHD9-208ENST00000563410 ANKRD20A5PA0PJZ0 165 aa15.08■□□□□ 0
CHD9-208ENST00000563410 C12orf74Q32Q52 190 aa15.08■□□□□ 0
CHD9-208ENST00000563410 NOXA1Q86UR1 476 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms