RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 TMEM230Q96A57 120 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 ENY2Q9NPA8 101 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 KLK11Q9UBX7 282 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 CELA1Q9UNI1 258 aa9.45□□□□□ -0.9
TPM1-220ENST00000559556 HELTA6NFD8 242 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 CD3DP04234 171 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 IGLC1P0CG04 106 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 DHRS2Q13268 280 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 MLANAQ16655 118 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 TRIM16LQ309B1 348 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 TIGITQ495A1 244 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 C16orf54Q6UWD8 224 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 CCDC71LQ8N9Z2 235 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 RRNAD1Q96FB5 475 aaKnown RBP9.44□□□□□ -0.9
TPM1-220ENST00000559556 CLEC5AQ9NY25 188 aa9.44□□□□□ -0.9
TPM1-220ENST00000559556 CCDC59Q9P031 241 aaKnown RBP9.44□□□□□ -0.9
TPM1-220ENST00000559556 A0A1B0GVY2 172 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 B3GALNT1O75752 331 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 ZNF182P17025 639 aaPredicted RBP9.43□□□□□ -0.9
TPM1-220ENST00000559556 HTR2BP41595 481 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 SPCS3P61009 180 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 CNPY1Q3B7I2 92 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 SP6Q3SY56 376 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 RNASE12Q5GAN4 147 aaKnown RBP9.43□□□□□ -0.9
TPM1-220ENST00000559556 PSMG4Q5JS54 123 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 Q6ZRM9 215 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 FAM219AQ8IW50 185 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 CENPSQ8N2Z9 138 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 OR1S2Q8NGQ3 325 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 OR52I2Q8NH67 350 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 ZFAND1Q8TCF1 268 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 DYNC2LI1Q8TCX1 351 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 RAB40CQ96S21 281 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 C1QTNF4Q9BXJ3 329 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 PTTG2Q9NZH5 202 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 COPZ2Q9P299 210 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 MTFP1Q9UDX5 166 aa9.43□□□□□ -0.9
TPM1-220ENST00000559556 RPS10-NUDT3A0A1W2PQS6 291 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 FAM90A26D6RGX4 464 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 HNRNPCP07910 306 aaKnown RBP eCLIP9.42□□□□□ -0.9
TPM1-220ENST00000559556 SLC25A4P12235 298 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 AP2S1P53680 142 aaPredicted RBP9.42□□□□□ -0.9
TPM1-220ENST00000559556 YPEL3P61236 119 aaPredicted RBP9.42□□□□□ -0.9
TPM1-220ENST00000559556 C12orf74Q32Q52 190 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 C2orf83Q53S99 150 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 MZT2AQ6P582 158 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 PRSS54Q6PEW0 395 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 LINC00299Q6ZSB3 139 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 OR4D10Q8NGI6 311 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 OR13C8Q8NGS7 320 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 OR52E5Q8NH55 327 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 TERB2Q8NHR7 220 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 RNASE11Q8TAA1 199 aaKnown RBP9.42□□□□□ -0.9
TPM1-220ENST00000559556 TMEM222Q9H0R3 208 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 SEPSECSQ9HD40 501 aaKnown RBP9.42□□□□□ -0.9
TPM1-220ENST00000559556 HSPG2P98160 4391 aa9.42□□□□□ -0.9
TPM1-220ENST00000559556 DEFB131BA0A096LNP1 70 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 CDS2O95674 445 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 CD74P04233 296 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 P0DMU3 169 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 OR10J1P30954 320 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 RND2P52198 227 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 SNRPD3P62318 126 aaKnown RBP9.41□□□□□ -0.9
TPM1-220ENST00000559556 USF2Q15853 346 aaPredicted RBP9.41□□□□□ -0.9
TPM1-220ENST00000559556 LHFPL5Q8TAF8 219 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 MARCH1Q8TCQ1 289 aa9.41□□□□□ -0.9
TPM1-220ENST00000559556 RNASEH2CQ8TDP1 164 aaKnown RBP9.41□□□□□ -0.9
TPM1-220ENST00000559556 HEYLQ9NQ87 328 aaPredicted RBP9.41□□□□□ -0.9
TPM1-220ENST00000559556 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.41□□□□□ -0.9
TPM1-220ENST00000559556 FAM25AB3EWG3 89 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 FAM25CB3EWG5 89 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 FAM25GB3EWG6 89 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 IL4P05112 153 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 NUTF2P61970 127 aaKnown RBP9.4□□□□□ -0.9
TPM1-220ENST00000559556 DHODHQ02127 395 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 POM121L12Q8N7R1 296 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 TMEM229BQ8NBD8 167 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 SLC24A4Q8NFF2 622 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 MCFD2Q8NI22 146 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 Q8WTZ3 238 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 GLYATL2Q8WU03 294 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 TMEM170AQ8WVE7 144 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 RBPMSQ93062 196 aaKnown RBP9.4□□□□□ -0.9
TPM1-220ENST00000559556 ABHD1Q96SE0 405 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 NDUFAF3Q9BU61 184 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 NRN1Q9NPD7 142 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 XCL2Q9UBD3 114 aa9.4□□□□□ -0.9
TPM1-220ENST00000559556 H3BMM0 161 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 BUB3O43684 328 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 GSTZ1O43708 216 aaPredicted RBP9.39□□□□□ -0.91
TPM1-220ENST00000559556 OR5AC1P0C628 307 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 HLA-DRB4P13762 266 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 S100A5P33763 92 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 TAS2R19P59542 299 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 SCGB2B2Q4G0G5 96 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 SIGLEC15Q6ZMC9 328 aa9.39□□□□□ -0.91
TPM1-220ENST00000559556 ZNF705AQ6ZN79 300 aaPredicted RBP9.39□□□□□ -0.91
TPM1-220ENST00000559556 ZNF767PQ75MW2 155 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms