RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 OR11H2Q8NH07 326 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 OR4X1Q8NH49 305 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 LHFPL5Q8TAF8 219 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 GLYATL2Q8WU03 294 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 METTL26Q96S19 204 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 FNDC4Q9H6D8 234 aaPredicted RBP4.93□□□□□ -1.62
SCAF11-211ENST00000547950 VSIRQ9H7M9 311 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 NAA60Q9H7X0 242 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 PRR13Q9NZ81 148 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 CACNG5Q9UF02 275 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 DNAH7Q8WXX0 4024 aa4.93□□□□□ -1.62
SCAF11-211ENST00000547950 TRAV30A0A087WSZ9 112 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 A0A1W2PS18 150 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 NUPR2A6NF83 97 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 DEFB4AO15263 64 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 SCGB2A1O75556 95 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 CA1P00915 261 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-211ENST00000547950 IGKV1-17P01599 117 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 AKR1C4P17516 323 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 HTR2BP41595 481 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 RPL5P46777 297 aaKnown RBP4.92□□□□□ -1.62
SCAF11-211ENST00000547950 P2RY1P47900 373 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 RBMS2Q15434 407 aaKnown RBP4.92□□□□□ -1.62
SCAF11-211ENST00000547950 FAM219AQ8IW50 185 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 FAM24BQ8N5W8 94 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 STXBP6Q8NFX7 210 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 OR52E5Q8NH55 327 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 Q8WTZ3 238 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 PHLDA1Q8WV24 401 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-211ENST00000547950 SMIM4Q8WVI0 70 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 RBPMSQ93062 196 aaKnown RBP4.92□□□□□ -1.62
SCAF11-211ENST00000547950 NARS2Q96I59 477 aaKnown RBP4.92□□□□□ -1.62
SCAF11-211ENST00000547950 TMEM231Q9H6L2 316 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 MCUBQ9NWR8 336 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 GPR132Q9UNW8 380 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 KCNIP3Q9Y2W7 256 aa4.92□□□□□ -1.62
SCAF11-211ENST00000547950 KLK5Q9Y337 293 aaPredicted RBP4.92□□□□□ -1.62
SCAF11-211ENST00000547950 CSMD3Q7Z407 3707 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 RPS10-NUDT3A0A1W2PQS6 291 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 ANKRD20A5PA0PJZ0 165 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 FABP12A6NFH5 140 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 CRYM-AS1A6NIL9 109 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 KNCNA6PVL3 124 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 CTDSPLO15194 276 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 IFNA10P01566 189 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 CRYBB3P26998 211 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 OR10J1P30954 320 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 TNFSF8P32971 234 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 RND2P52198 227 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 TMBIM6P55061 237 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 NANOS2P60321 138 aaKnown RBP4.91□□□□□ -1.62
SCAF11-211ENST00000547950 TMEM187Q14656 261 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 SURF2Q15527 256 aaPredicted RBP4.91□□□□□ -1.62
SCAF11-211ENST00000547950 BSXQ3C1V8 233 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 C2orf83Q53S99 150 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 PRSS54Q6PEW0 395 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 LYZL2Q7Z4W2 148 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 STHQ8IWL8 128 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 C11orf45Q8TAV5 145 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 DYNC2LI1Q8TCX1 351 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 RAB2BQ8WUD1 216 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 GATAD1Q8WUU5 269 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 LINC00476Q8WZB0 136 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 NPIPB3Q92617 1050 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 ACY3Q96HD9 319 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 GRAMD2BQ96HH9 432 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 PRRT1Q99946 306 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 FBXL17Q9UF56 701 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 RSL24D1Q9UHA3 163 aaKnown RBP4.91□□□□□ -1.62
SCAF11-211ENST00000547950 SCP2D1Q9UJQ7 156 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 TMEM56-RWDD3S4R434 201 aa4.91□□□□□ -1.62
SCAF11-211ENST00000547950 RYR2Q92736 4967 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 TRAV2A0A0B4J234 112 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 K7EQG2 157 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 GSTZ1O43708 216 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-211ENST00000547950 NOL3O60936 208 aaKnown RBP4.9□□□□□ -1.63
SCAF11-211ENST00000547950 IFNA4P05014 189 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 ZNF688P0C7X2 276 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 IGLC1P0CG04 106 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 RD3LP0DJH9 198 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 SULT1A3P0DMM9 295 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 SULT1A4P0DMN0 295 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 SLC25A4P12235 298 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 ATF4P18848 351 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-211ENST00000547950 NPY1RP25929 384 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 EIF2B2P49770 351 aaKnown RBP4.9□□□□□ -1.63
SCAF11-211ENST00000547950 YPEL3P61236 119 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-211ENST00000547950 DHRS2Q13268 280 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 AARDQ4LEZ3 155 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 ACTL10Q5JWF8 245 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 ETFRF1Q6IPR1 90 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 NOXA1Q86UR1 476 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 SLC24A4Q8NFF2 622 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 OR1S2Q8NGQ3 325 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 MCFD2Q8NI22 146 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 RNASEH2CQ8TDP1 164 aaKnown RBP4.9□□□□□ -1.63
SCAF11-211ENST00000547950 SCGB3A2Q96PL1 93 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 RAB40CQ96S21 281 aa4.9□□□□□ -1.63
SCAF11-211ENST00000547950 CCDC59Q9P031 241 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms