RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 GATAD1Q8WUU5 269 aa16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 IL22RA2Q969J5 263 aa16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 RARRES2Q99969 163 aa16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 ZFAND3Q9H8U3 227 aa16.4■□□□□ 0.22
TRAPPC4-210ENST00000531290 A0A0G2JRQ6 117 aa16.39■□□□□ 0.21
TRAPPC4-210ENST00000531290 CLN5O75503 358 aa16.39■□□□□ 0.21
TRAPPC4-210ENST00000531290 Q6ZRM9 215 aa16.39■□□□□ 0.21
TRAPPC4-210ENST00000531290 OR4X1Q8NH49 305 aa16.39■□□□□ 0.21
TRAPPC4-210ENST00000531290 TMEM230Q96A57 120 aa16.39■□□□□ 0.21
TRAPPC4-210ENST00000531290 METTL26Q96S19 204 aa16.39■□□□□ 0.21
TRAPPC4-210ENST00000531290 TMEM56-RWDD3S4R434 201 aa16.39■□□□□ 0.21
TRAPPC4-210ENST00000531290 NAP1L6A6NFF2 107 aa16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 CENPXA8MT69 81 aa16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 DEFB131AP59861 70 aa16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 MLANAQ16655 118 aa16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 TMEM128Q5BJH2 165 aa16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 LGI3Q8N145 548 aa16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 OR52E5Q8NH55 327 aa16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 FNDC4Q9H6D8 234 aaPredicted RBP16.38■□□□□ 0.21
TRAPPC4-210ENST00000531290 TRAV2A0A0B4J234 112 aa16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 RPS10-NUDT3A0A1W2PQS6 291 aa16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 HTR2BP41595 481 aa16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 TMEM187Q14656 261 aa16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 LHFPL5Q8TAF8 219 aa16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 NARS2Q96I59 477 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 HEYLQ9NQ87 328 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 MRPL36Q9P0J6 103 aaKnown RBP16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 CACNG5Q9UF02 275 aa16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 RABAC1Q9UI14 185 aa16.37■□□□□ 0.21
TRAPPC4-210ENST00000531290 TRAV30A0A087WSZ9 112 aa16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 VAMP1P23763 118 aa16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 RBMS2Q15434 407 aaKnown RBP16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 BAK1Q16611 211 aa16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 BSXQ3C1V8 233 aa16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 LEMD1Q68G75 181 aa16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 OR11H2Q8NH07 326 aa16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 GPR146Q96CH1 333 aa16.36■□□□□ 0.21
TRAPPC4-210ENST00000531290 A0A0B4J2A0 478 aa16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 LINC00854A0A1B0GVQ3 168 aa16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 CA1P00915 261 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 SULT1A3P0DMM9 295 aa16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 SULT1A4P0DMN0 295 aa16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 AARDQ4LEZ3 155 aa16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 CENPSQ8N2Z9 138 aa16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 PHLDA1Q8WV24 401 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 SHPKQ9UHJ6 478 aa16.35■□□□□ 0.21
TRAPPC4-210ENST00000531290 CEBPZOSA8MTT3 80 aa16.34■□□□□ 0.21
TRAPPC4-210ENST00000531290 CRYBB3P26998 211 aa16.34■□□□□ 0.21
TRAPPC4-210ENST00000531290 TIGITQ495A1 244 aa16.34■□□□□ 0.21
TRAPPC4-210ENST00000531290 STHQ8IWL8 128 aa16.34■□□□□ 0.21
TRAPPC4-210ENST00000531290 STXBP6Q8NFX7 210 aa16.34■□□□□ 0.21
TRAPPC4-210ENST00000531290 GRAMD2BQ96HH9 432 aa16.34■□□□□ 0.21
TRAPPC4-210ENST00000531290 PRR13Q9NZ81 148 aa16.34■□□□□ 0.21
TRAPPC4-210ENST00000531290 IGKV1-17P01599 117 aa16.33■□□□□ 0.2
TRAPPC4-210ENST00000531290 CCR6P51684 374 aa16.33■□□□□ 0.2
TRAPPC4-210ENST00000531290 SUPT4H1P63272 117 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-210ENST00000531290 FAM24BQ8N5W8 94 aa16.33■□□□□ 0.2
TRAPPC4-210ENST00000531290 Q8WTZ3 238 aa16.33■□□□□ 0.2
TRAPPC4-210ENST00000531290 C7orf50Q9BRJ6 194 aaKnown RBP16.33■□□□□ 0.2
TRAPPC4-210ENST00000531290 MFFQ9GZY8 342 aa16.33■□□□□ 0.2
TRAPPC4-210ENST00000531290 SLC25A4P12235 298 aa16.32■□□□□ 0.2
TRAPPC4-210ENST00000531290 IL7P13232 177 aa16.32■□□□□ 0.2
TRAPPC4-210ENST00000531290 P2RY1P47900 373 aa16.32■□□□□ 0.2
TRAPPC4-210ENST00000531290 C2orf83Q53S99 150 aa16.32■□□□□ 0.2
TRAPPC4-210ENST00000531290 LYZL2Q7Z4W2 148 aa16.32■□□□□ 0.2
TRAPPC4-210ENST00000531290 C11orf45Q8TAV5 145 aa16.32■□□□□ 0.2
TRAPPC4-210ENST00000531290 RNASEH2CQ8TDP1 164 aaKnown RBP16.32■□□□□ 0.2
TRAPPC4-210ENST00000531290 DUXBA0A1W2PPF3 345 aa16.31■□□□□ 0.2
TRAPPC4-210ENST00000531290 EIF2B2P49770 351 aaKnown RBP16.31■□□□□ 0.2
TRAPPC4-210ENST00000531290 SMCO1Q147U7 214 aa16.31■□□□□ 0.2
TRAPPC4-210ENST00000531290 NOXA1Q86UR1 476 aa16.31■□□□□ 0.2
TRAPPC4-210ENST00000531290 SLC24A4Q8NFF2 622 aa16.31■□□□□ 0.2
TRAPPC4-210ENST00000531290 OR1S2Q8NGQ3 325 aa16.31■□□□□ 0.2
TRAPPC4-210ENST00000531290 K7EQG2 157 aa16.3■□□□□ 0.2
TRAPPC4-210ENST00000531290 IFNA4P05014 189 aa16.3■□□□□ 0.2
TRAPPC4-210ENST00000531290 RND2P52198 227 aa16.3■□□□□ 0.2
TRAPPC4-210ENST00000531290 ETFRF1Q6IPR1 90 aa16.3■□□□□ 0.2
TRAPPC4-210ENST00000531290 PRSS54Q6PEW0 395 aa16.3■□□□□ 0.2
TRAPPC4-210ENST00000531290 OR1S1Q8NH92 325 aa16.3■□□□□ 0.2
TRAPPC4-210ENST00000531290 C11orf68Q9H3H3 251 aaKnown RBP16.3■□□□□ 0.2
TRAPPC4-210ENST00000531290 HELTA6NFD8 242 aa16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 NDUFB6O95139 128 aa16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 IGLC1P0CG04 106 aa16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 OR10J1P30954 320 aa16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 NANOS2P60321 138 aaKnown RBP16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 UBE2MP61081 183 aaKnown RBP16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 LINC00299Q6ZSB3 139 aa16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 SDHCQ99643 169 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 FBXL17Q9UF56 701 aa16.29■□□□□ 0.2
TRAPPC4-210ENST00000531290 NXPH3O95157 252 aa16.28■□□□□ 0.2
TRAPPC4-210ENST00000531290 SFT2D2O95562 160 aa16.28■□□□□ 0.2
TRAPPC4-210ENST00000531290 ZNF688P0C7X2 276 aa16.28■□□□□ 0.2
TRAPPC4-210ENST00000531290 YPEL3P61236 119 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC4-210ENST00000531290 PPP1R1AQ13522 171 aa16.28■□□□□ 0.2
TRAPPC4-210ENST00000531290 CNPY1Q3B7I2 92 aa16.28■□□□□ 0.2
TRAPPC4-210ENST00000531290 NMSQ5H8A3 153 aa16.28■□□□□ 0.2
TRAPPC4-210ENST00000531290 DEFB4AO15263 64 aa16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 HNRNPCP07910 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 NPY1RP25929 384 aa16.27■□□□□ 0.2
TRAPPC4-210ENST00000531290 AP2S1P53680 142 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms