RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, human

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-215	ENST00000528965	OR4X1	Q8NH49	305 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	HRH4	Q9H3N8	390 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	NAA60	Q9H7X0	242 aa		11.42	□□□□□ -0.58
CTSB-215	ENST00000528965	TRAV30	A0A087WSZ9	112 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965		A0A1B0GU03	582 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965	OR5AC1	P0C628	307 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965	AKR1C4	P17516	323 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965	P2RY1	P47900	373 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965	FAM219A	Q8IW50	185 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965	LILRB2	Q8N423	598 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965	TMEM230	Q96A57	120 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965	TMEM222	Q9H0R3	208 aa		11.41	□□□□□ -0.58
CTSB-215	ENST00000528965		K7EQG2	157 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	DEFB4A	O15263	64 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	ANXA3	P12429	323 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	MIF	P14174	115 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	UCP1	P25874	307 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	CRYBB3	P26998	211 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	ETV6	P41212	452 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	TRPT1	Q86TN4	253 aa	Known RBP	11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	GPR132	Q9UNW8	380 aa		11.4	□□□□□ -0.58
CTSB-215	ENST00000528965	HELT	A6NFD8	242 aa		11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	ZNF701	M0R085	212 aa	Predicted RBP	11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	ZNF688	P0C7X2	276 aa		11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	HTR2B	P41595	481 aa		11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	SPCS3	P61009	180 aa		11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	TMEM268	Q5VZI3	342 aa		11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	FAM24B	Q8N5W8	94 aa		11.39	□□□□□ -0.59
CTSB-215	ENST00000528965		Q8NAQ8	132 aa		11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	RBPMS	Q93062	196 aa	Known RBP	11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.39	□□□□□ -0.59
CTSB-215	ENST00000528965	KMT2A	Q03164	3969 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	IGHV4-28	A0A0C4DH34	117 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	CRYM-AS1	A6NIL9	109 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	IGLL5	B9A064	214 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	CDS2	O95674	445 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	SLC25A4	P12235	298 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	AP2S1	P53680	142 aa	Predicted RBP	11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	BSX	Q3C1V8	233 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	OR1S2	Q8NGQ3	325 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	HEYL	Q9NQ87	328 aa	Predicted RBP	11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	FRAS1	Q86XX4	4008 aa		11.38	□□□□□ -0.59
CTSB-215	ENST00000528965	PIGBOS1	A0A0B4J2F0	54 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	CEBPZOS	A8MTT3	80 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	TIGIT	Q495A1	244 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	ACTL10	Q5JWF8	245 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	TMED4	Q7Z7H5	227 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	SELENOH	Q8IZQ5	122 aa	Known RBP	11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	OR52E5	Q8NH55	327 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	DCANP1	Q8TF63	244 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	SOST	Q9BQB4	213 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	NDUFA13	Q9P0J0	144 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	CACFD1	Q9UGQ2	172 aa		11.37	□□□□□ -0.59
CTSB-215	ENST00000528965	TRAV10	A0A0B4J240	114 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965		A0A0G2JRQ6	117 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	ZNF705E	A8MWA4	302 aa	Predicted RBP	11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	IGKV1-17	P01599	117 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.36	□□□□□ -0.59	1e-6	■■□□□ 13.5
CTSB-215	ENST00000528965	SNRPD3	P62318	126 aa	Known RBP	11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	DHRS2	Q13268	280 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	AARD	Q4LEZ3	155 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	TRIQK	Q629K1	86 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	ETFRF1	Q6IPR1	90 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	SLC24A4	Q8NFF2	622 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.36	□□□□□ -0.59
CTSB-215	ENST00000528965		Q8WTZ3	238 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	GLYATL2	Q8WU03	294 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	MRPL36	Q9P0J6	103 aa	Known RBP	11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	TBC1D24	Q9ULP9	559 aa		11.36	□□□□□ -0.59
CTSB-215	ENST00000528965	KNCN	A6PVL3	124 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	CENPX	A8MT69	81 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	C4BPB	P20851	252 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	HLA-DMB	P28068	263 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	OR10J1	P30954	320 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	RND2	P52198	227 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	YPEL3	P61236	119 aa	Predicted RBP	11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	NUTF2	P61970	127 aa	Known RBP	11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	SRPX	P78539	464 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	PSMG4	Q5JS54	123 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	NOXA1	Q86UR1	476 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	LGI3	Q8N145	548 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	GPR146	Q96CH1	333 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	C1QTNF4	Q9BXJ3	329 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	CACNG5	Q9UF02	275 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	APLN	Q9ULZ1	77 aa		11.35	□□□□□ -0.59
CTSB-215	ENST00000528965	GIG44	P09565	113 aa	Predicted RBP	11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	IGLC1	P0CG04	106 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	RBMY1A1	P0DJD3	496 aa	Known RBP	11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	RBMY1C	P0DJD4	496 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	SULT1A3	P0DMM9	295 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	SULT1A4	P0DMN0	295 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	NUP62	P37198	522 aa	Predicted RBP	11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	PRR20E	P86478	221 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	PRR20C	P86479	221 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	PRR20D	P86480	221 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	PRR20B	P86481	221 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	PRR20A	P86496	221 aa		11.34	□□□□□ -0.59
CTSB-215	ENST00000528965	RBMY1F	Q15415	496 aa	Known RBP	11.34	□□□□□ -0.59

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