RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 UBE2CO00762 179 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 IGKV1-17P01599 117 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 NPPCP23582 126 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 APOC4P55056 127 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 ZNF846Q147U1 533 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 PRSS54Q6PEW0 395 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 KIR2DL5AQ8N109 375 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 CENPSQ8N2Z9 138 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 KIR2DL5BQ8NHK3 375 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 IL17DQ8TAD2 202 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 DTD1Q8TEA8 209 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 METTL26Q96S19 204 aa13.71□□□□□ -0.21
TSPAN4-216ENST00000526055 SFT2D2O95562 160 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 IFNA10P01566 189 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 IGLC1P0CG04 106 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 VAMP1P23763 118 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 YPEL3P61236 119 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 TCF24Q7RTU0 167 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 OR1S1Q8NH92 325 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 TMEM170AQ8WVE7 144 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 NARS2Q96I59 477 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 RETNQ9HD89 108 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 UBQLN2Q9UHD9 624 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 TMED3Q9Y3Q3 217 aa13.7□□□□□ -0.22
TSPAN4-216ENST00000526055 IGHV3-49A0A0A0MS15 119 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 FAM90A26D6RGX4 464 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 PITX3O75364 302 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 CRYBB3P26998 211 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 RND2P52198 227 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 Q6ZWC4 215 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 ST8SIA2Q92186 375 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 RBKSQ9H477 322 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 TP53TG1Q9Y2A0 90 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 RYR3Q15413 4870 aa13.69□□□□□ -0.22
TSPAN4-216ENST00000526055 DFFBO76075 338 aa13.68□□□□□ -0.22
TSPAN4-216ENST00000526055 NXPH3O95157 252 aa13.68□□□□□ -0.22
TSPAN4-216ENST00000526055 OR10J1P30954 320 aa13.68□□□□□ -0.22
TSPAN4-216ENST00000526055 PPP1R1AQ13522 171 aa13.68□□□□□ -0.22
TSPAN4-216ENST00000526055 TIGITQ495A1 244 aa13.68□□□□□ -0.22
TSPAN4-216ENST00000526055 Q8WTZ3 238 aa13.68□□□□□ -0.22
TSPAN4-216ENST00000526055 IGHV3OR16-13A0A075B7E8 117 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 IGHV3-74A0A0B4J1X5 117 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 LINC00854A0A1B0GVQ3 168 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 MED6O75586 246 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 NDUFB6O95139 128 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 GRAMD2BQ96HH9 432 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 OVOL2Q9BRP0 275 aa13.67□□□□□ -0.22
TSPAN4-216ENST00000526055 DNASE2O00115 360 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-216ENST00000526055 APOHP02749 345 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-216ENST00000526055 IFNA4P05014 189 aa13.66□□□□□ -0.22
TSPAN4-216ENST00000526055 GPX4P36969 197 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-216ENST00000526055 STPG3Q8N7X2 389 aa13.66□□□□□ -0.22
TSPAN4-216ENST00000526055 NPIPB3Q92617 1050 aa13.66□□□□□ -0.22
TSPAN4-216ENST00000526055 CIB3Q96Q77 187 aaPredicted RBP13.66□□□□□ -0.22
TSPAN4-216ENST00000526055 LYRM1O43325 122 aa13.65□□□□□ -0.22
TSPAN4-216ENST00000526055 TFPI2P48307 235 aa13.65□□□□□ -0.22
TSPAN4-216ENST00000526055 EIF2B2P49770 351 aaKnown RBP13.65□□□□□ -0.22
TSPAN4-216ENST00000526055 LILRB2Q8N423 598 aa13.65□□□□□ -0.22
TSPAN4-216ENST00000526055 MS4A6AQ9H2W1 248 aa13.65□□□□□ -0.22
TSPAN4-216ENST00000526055 MAP6D1Q9H9H5 199 aa13.65□□□□□ -0.22
TSPAN4-216ENST00000526055 U3KQE9 123 aa13.65□□□□□ -0.22
TSPAN4-216ENST00000526055 IGKV3-7A0A075B6H7 116 aa13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 TOMM40O96008 361 aa13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 P2RY1P47900 373 aa13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 RAB11AP62491 216 aa13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 RPL11P62913 178 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 RPP30P78346 268 aaKnown RBP13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 GBGT1Q8N5D6 347 aa13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 ACY3Q96HD9 319 aa13.64□□□□□ -0.23
TSPAN4-216ENST00000526055 IGHV3-66A0A0C4DH42 116 aa13.63□□□□□ -0.23
TSPAN4-216ENST00000526055 C9orf170A2RU37 121 aa13.63□□□□□ -0.23
TSPAN4-216ENST00000526055 UPK1BO75841 260 aa13.63□□□□□ -0.23
TSPAN4-216ENST00000526055 RD3LP0DJH9 198 aa13.63□□□□□ -0.23
TSPAN4-216ENST00000526055 AP2S1P53680 142 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-216ENST00000526055 MZT2BQ6NZ67 158 aa13.63□□□□□ -0.23
TSPAN4-216ENST00000526055 APRG1Q8IVJ8 170 aa13.63□□□□□ -0.23
TSPAN4-216ENST00000526055 HELTA6NFD8 242 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 PLA2G10O15496 165 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 SPRY2O43597 315 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 FABP1P07148 127 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 NUP62P37198 522 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 GGNBP1Q5YKI7 109 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 ZFAND6Q6FIF0 208 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 COQ8AQ8NI60 647 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 RNF183Q96D59 192 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 SLC35E1Q96K37 410 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 PFDN2Q9UHV9 154 aa13.62□□□□□ -0.23
TSPAN4-216ENST00000526055 SYNGR2O43760 224 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 IL4P05112 153 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 HOXB5P09067 269 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 RPL35AP18077 110 aaKnown RBP13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 BTCP35070 178 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 GAMTQ14353 236 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 OR51G1Q8NGK1 321 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 CSTL1Q9H114 145 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
TSPAN4-216ENST00000526055 K7EQG2 157 aa13.6□□□□□ -0.23
TSPAN4-216ENST00000526055 OR4E1P0C645 316 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms