RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 SIGLECL1Q8N7X8 197 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 RNASE6Q93091 150 aaKnown RBP8.92□□□□□ -0.98
HDAC9-228ENST00000524023 FXYD5Q96DB9 178 aa8.92□□□□□ -0.98
HDAC9-228ENST00000524023 BMPR1BO00238 502 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 MC5RP33032 325 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 NUTF2P61970 127 aaKnown RBP8.91□□□□□ -0.98
HDAC9-228ENST00000524023 TMEM155Q4W5P6 130 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 FAM231DQ6ZW35 169 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 LINC00305Q7Z4B0 112 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 C20orf144Q9BQM9 153 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 KAAG1Q9UBP8 84 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 SH3BGRL2Q9UJC5 107 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 FBXL7Q9UJT9 491 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 SSUH2Q9Y2M2 353 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 RNF114Q9Y508 228 aa8.91□□□□□ -0.98
HDAC9-228ENST00000524023 ZFHX2Q9C0A1 2572 aaPredicted RBP8.91□□□□□ -0.98
HDAC9-228ENST00000524023 TRAV34A0A0B4J273 112 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 VSTM5A8MXK1 200 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 C22orf46C9J442 243 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 M0R143 59 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 IGHV1-8P0DP01 117 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 RAB4AP20338 218 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 SRIP30626 198 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 COMPP49747 757 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-228ENST00000524023 ASPHD1Q5U4P2 390 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 RUSC1-AS1Q66K80 236 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 VN1R17PQ8TDU5 208 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 MBD6Q96DN6 1003 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 ABHD17AQ96GS6 310 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 RCHY1Q96PM5 261 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 FAM103A1Q9BTL3 118 aaKnown RBP8.9□□□□□ -0.98
HDAC9-228ENST00000524023 SSBP3Q9BWW4 388 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-228ENST00000524023 GVINP1Q7Z2Y8 2422 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 IGLC7A0M8Q6 106 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 ZNF253O75346 499 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 PLAUP00749 431 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 MYCNOSP40205 109 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 LGALS7P47929 136 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 SSX8Q7RTT4 187 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 C11orf42Q8N5U0 333 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 KCNS1Q96KK3 526 aa8.9□□□□□ -0.98
HDAC9-228ENST00000524023 ZNF331Q9NQX6 463 aaPredicted RBP8.9□□□□□ -0.98
HDAC9-228ENST00000524023 TBL2Q9Y4P3 447 aaKnown RBP8.9□□□□□ -0.98
HDAC9-228ENST00000524023 IGHV3-72A0A0B4J1Y9 119 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 A0A1W2PS18 150 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 ENSAO43768 121 aaKnown RBP8.89□□□□□ -0.99
HDAC9-228ENST00000524023 MOSP00540 346 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 APCSP02743 223 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 CRYGCP07315 174 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 TMEM183BQ1AE95 376 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 PVRIGQ6DKI7 326 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 ETFRF1Q6IPR1 90 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 HCP5Q6MZN7 132 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 GFRALQ6UXV0 394 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 NUDT10Q8NFP7 164 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 WIPF2Q8TF74 440 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-228ENST00000524023 NUDT11Q96G61 164 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 GRAMD2BQ96HH9 432 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 TMEM133Q9H2Q1 129 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 DYNLRB1Q9NP97 96 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 TNFRSF19Q9NS68 423 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 ZNF586Q9NXT0 402 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 SHISA9B4DS77 424 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 E7EQL1 145 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 ORM2P19652 201 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 AMTP48728 403 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 MFAP2P55001 183 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 TBR1Q16650 682 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 RASL11AQ6T310 242 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 ZNF705AQ6ZN79 300 aaPredicted RBP8.89□□□□□ -0.99
HDAC9-228ENST00000524023 TEX45Q8NA69 505 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 Q8NA96 180 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 STXBP6Q8NFX7 210 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 PERPQ96FX8 193 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 MIEN1Q9BRT3 115 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 VAMP8Q9BV40 100 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 NRN1Q9NPD7 142 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 PAM16Q9Y3D7 125 aa8.89□□□□□ -0.99
HDAC9-228ENST00000524023 MALRD1Q5VYJ5 2156 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 KRTDAPP60985 99 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 GNG5P63218 68 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 SLAQ13239 276 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 Q8N976 141 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 NUP35Q8NFH5 326 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 OR1B1Q8NGR6 318 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 TRGV9Q99603 122 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 ATG101Q9BSB4 218 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 C7orf69Q9H7B7 122 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 EPDR1Q9UM22 224 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 POLEQ07864 2286 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 DCHS1Q96JQ0 3298 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 TCAPO15273 167 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 ZNF324O75467 553 aaPredicted RBP8.88□□□□□ -0.99
HDAC9-228ENST00000524023 PMCHP20382 165 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 CNTFRP26992 372 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 RPL27AP46776 148 aaKnown RBP8.88□□□□□ -0.99
HDAC9-228ENST00000524023 ZNF841Q6ZN19 808 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 C19orf35Q6ZS72 473 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 BLNKQ8WV28 456 aa8.88□□□□□ -0.99
HDAC9-228ENST00000524023 TMEM68Q96MH6 324 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms