RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 GLYATL2Q8WU03 294 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 RAB2BQ8WUD1 216 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 RBPMSQ93062 196 aaKnown RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 RTBDNQ9BSG5 229 aaPredicted RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 NAA60Q9H7X0 242 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 HEYLQ9NQ87 328 aaPredicted RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 CACNG5Q9UF02 275 aa8.39□□□□□ -1.07
HMGCS1-204ENST00000507293 CEBPZOSA8MTT3 80 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 IGLC1P0CG04 106 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 DHRS2Q13268 280 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 MEF2DQ14814 521 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 C2orf83Q53S99 150 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 TMEM41BQ5BJD5 291 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 TMEM268Q5VZI3 342 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 PRSS54Q6PEW0 395 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 SELENOHQ8IZQ5 122 aaKnown RBP8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 SLC24A4Q8NFF2 622 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 OR1S2Q8NGQ3 325 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 GLMPQ8WWB7 406 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 GPR146Q96CH1 333 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 CLEC5AQ9NY25 188 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 U3KQE9 123 aa8.38□□□□□ -1.07
HMGCS1-204ENST00000507293 HELTA6NFD8 242 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 IGLL5B9A064 214 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 DISC1C4P0D8 188 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 C11orf94C9JXX5 98 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 RGS5O15539 181 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 NXPH3O95157 252 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 HNRNPCP07910 306 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 SLC25A4P12235 298 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 MIFP14174 115 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 OR10J1P30954 320 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 EIF2B2P49770 351 aaKnown RBP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 TCTAP57738 103 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 YPEL3P61236 119 aaPredicted RBP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 MRPS10P82664 201 aaKnown RBP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 DHODHQ02127 395 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 SSBP1Q04837 148 aaKnown RBP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 SURF2Q15527 256 aaPredicted RBP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 USF2Q15853 346 aaPredicted RBP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 PSMG4Q5JS54 123 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 C16orf54Q6UWD8 224 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 OR4C16Q8NGL9 310 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 RNASEH2CQ8TDP1 164 aaKnown RBP8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 Q8WTZ3 238 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 TMEM170AQ8WVE7 144 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 HRH4Q9H3N8 390 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 APLNQ9ULZ1 77 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 X6R8D5 127 aa8.37□□□□□ -1.07
HMGCS1-204ENST00000507293 CRYM-AS1A6NIL9 109 aa8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 ZNF705EA8MWA4 302 aaPredicted RBP8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 CTDSP2O14595 271 aa8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 NPY1RP25929 384 aa8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 SMIM4Q8WVI0 70 aa8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 RAB40CQ96S21 281 aa8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 PRR13Q9NZ81 148 aa8.36□□□□□ -1.07
HMGCS1-204ENST00000507293 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 IL4P05112 153 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 AKAIN1P0CW23 69 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 SPCS2Q15005 226 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 Q6ZTC4 211 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 CSNK1G2-AS1Q8NCQ2 148 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 NPIPB3Q92617 1050 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 ACY3Q96HD9 319 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 TBC1D24Q9ULP9 559 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 GPR132Q9UNW8 380 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 TMEM56-RWDD3S4R434 201 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 DNAH10Q8IVF4 4471 aa8.35□□□□□ -1.07
HMGCS1-204ENST00000507293 FRAS1Q86XX4 4008 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 CCDC160A6NGH7 325 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 FAM90A26D6RGX4 464 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 CTDSPLO15194 276 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 TOMM40O96008 361 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 SULT1A3P0DMM9 295 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 SULT1A4P0DMN0 295 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 AP2S1P53680 142 aaPredicted RBP8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 IL18Q14116 193 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 NMSQ5H8A3 153 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 ETFRF1Q6IPR1 90 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 OR51S1Q8NGJ8 323 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 PRRT1Q99946 306 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 NRN1Q9NPD7 142 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 CELA1Q9UNI1 258 aa8.34□□□□□ -1.07
HMGCS1-204ENST00000507293 VPS13DQ5THJ4 4388 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 KMT2AQ03164 3969 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 IGHV4-4A0A075B6R2 117 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 BUB3O43684 328 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 GSTZ1O43708 216 aaPredicted RBP8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 IFNA10P01566 189 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 RD3LP0DJH9 198 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 SNRPD3P62318 126 aaKnown RBP8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 SIGLEC15Q6ZMC9 328 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 ZNF767PQ75MW2 155 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 NOXA1Q86UR1 476 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 CENPSQ8N2Z9 138 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 OR51G1Q8NGK1 321 aa8.33□□□□□ -1.08
HMGCS1-204ENST00000507293 IL22RA2Q969J5 263 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms