RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 CACYBPQ9HB71 228 aaKnown RBP2.93□□□□□ -1.94
HMGB1-207ENST00000468384 MCUBQ9NWR8 336 aa2.93□□□□□ -1.94
HMGB1-207ENST00000468384 CLN6Q9NWW5 311 aa2.93□□□□□ -1.94
HMGB1-207ENST00000468384 OR1A1Q9P1Q5 309 aa2.93□□□□□ -1.94
HMGB1-207ENST00000468384 CYB5R1Q9UHQ9 305 aa2.93□□□□□ -1.94
HMGB1-207ENST00000468384 IGKV1D-8A0A087WSZ0 117 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 A0A096LPF7 62 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 SMIM24O75264 130 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 KBTBD11O94819 623 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 LALBAP00709 142 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 IGHV3-23P01764 117 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 HBE1P02100 147 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 IL6P05231 212 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 C2P06681 752 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 CD3GP09693 182 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 SPRR2EP22531 72 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 CFL1P23528 166 aaKnown RBP2.92□□□□□ -1.94
HMGB1-207ENST00000468384 SPRR2BP35325 72 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 SPRR2AP35326 72 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 RPL14P50914 215 aaKnown RBP2.92□□□□□ -1.94
HMGB1-207ENST00000468384 ZNF137PP52743 207 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 NCALDP61601 193 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 RPL32P62910 135 aaKnown RBP2.92□□□□□ -1.94
HMGB1-207ENST00000468384 PRKCDQ05655 676 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 TAL2Q16559 108 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 DNAL1Q4LDG9 190 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 ACTL10Q5JWF8 245 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 SSX6Q7RTT6 188 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 C10orf126Q8N4M7 172 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 ZNF738Q8NE65 137 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 OR5A2Q8NGI9 324 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 OR2G2Q8NGZ5 317 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 RSG1Q9BU20 258 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 TMBIM4Q9HC24 238 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 DAZ1Q9NQZ3 744 aaKnown RBP2.92□□□□□ -1.94
HMGB1-207ENST00000468384 SLC25A37Q9NYZ2 338 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 LGALS13Q9UHV8 139 aa2.92□□□□□ -1.94
HMGB1-207ENST00000468384 TRAV8-7A0A075B6U6 113 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 IGHV3-35A0A0C4DH35 117 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 A0A1B0GTI1 187 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 A0A1B0GU03 582 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 H3BNG1 76 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 CHP2O43745 196 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 RPP14O95059 124 aaKnown RBP2.91□□□□□ -1.94
HMGB1-207ENST00000468384 CTXN2P0C2S0 81 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 SLC2A5P22732 501 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 CRISP3P54108 245 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 NUTF2P61970 127 aaKnown RBP2.91□□□□□ -1.94
HMGB1-207ENST00000468384 RPL38P63173 70 aaKnown RBP2.91□□□□□ -1.94
HMGB1-207ENST00000468384 PAFAH1B2P68402 229 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 SS18Q15532 418 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 IDNKQ5T6J7 187 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 ACOT7LQ6ZUV0 252 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 PDIK1LQ8N165 341 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 KRTCAP2Q8N6L1 136 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 UBL4BQ8N7F7 174 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 OR5D18Q8NGL1 313 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 OR51A7Q8NH64 312 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 C7orf33Q8WU49 177 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 SEC22AQ96IW7 307 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 LINC00479Q96M42 142 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 OR2A7Q96R45 310 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 CIB1Q99828 191 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 IFT46Q9NQC8 304 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 PLEKHJ1Q9NW61 149 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 CALML5Q9NZT1 146 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 TFR2Q9UP52 801 aa2.91□□□□□ -1.94
HMGB1-207ENST00000468384 A0A0G2JRQ6 117 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 ANKRD20A5PA0PJZ0 165 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 DHRS7CA6NNS2 312 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 H7C423 109 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 MRPS12O15235 138 aaKnown RBP2.9□□□□□ -1.95
HMGB1-207ENST00000468384 SLC22A1O15245 554 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 SLC31A2O15432 143 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 APELAP0DMC3 54 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 AP3S2P59780 193 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 OR2B8PP59922 312 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 POLR2GP62487 172 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGB1-207ENST00000468384 FCN2Q15485 313 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 ATP6AP1Q15904 470 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 COX19Q49B96 90 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 ZC2HC1BQ5TFG8 222 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 LHFPL3Q86UP9 236 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 SLC25A42Q86VD7 318 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 NRMQ8IXM6 262 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 ENTHD1Q8IYW4 607 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 VKORC1L1Q8N0U8 176 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 PUSL1Q8N0Z8 303 aaKnown RBP2.9□□□□□ -1.95
HMGB1-207ENST00000468384 CBR4Q8N4T8 237 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 DUSP18Q8NEJ0 188 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 OR4C16Q8NGL9 310 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 OR6K6Q8NGW6 343 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 RASL10AQ92737 203 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 EEF1AKMT3Q96AZ1 226 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 PGLYRP4Q96LB8 373 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 FKBP14Q9NWM8 211 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 SDHAF2Q9NX18 166 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 METTL1Q9UBP6 276 aaKnown RBP2.9□□□□□ -1.95
HMGB1-207ENST00000468384 ING4Q9UNL4 249 aa2.9□□□□□ -1.95
HMGB1-207ENST00000468384 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms