RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 ERVFC1-1P60608 527 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 SUMO1P63165 101 aaKnown RBP10.98□□□□□ -0.65
THBS3-202ENST00000428962 ZNF90Q03938 601 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 RPEL1Q2QD12 228 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 TNFRSF19Q9NS68 423 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 DMRT1Q9Y5R6 373 aa10.98□□□□□ -0.65
THBS3-202ENST00000428962 LY6LH3BQJ8 138 aa10.97□□□□□ -0.65
THBS3-202ENST00000428962 M0R1W7 72 aa10.97□□□□□ -0.65
THBS3-202ENST00000428962 CNTFRP26992 372 aa10.97□□□□□ -0.65
THBS3-202ENST00000428962 CEACAM3P40198 252 aa10.97□□□□□ -0.65
THBS3-202ENST00000428962 HCP5Q6MZN7 132 aa10.97□□□□□ -0.65
THBS3-202ENST00000428962 TMEM116Q8NCL8 245 aa10.97□□□□□ -0.65
THBS3-202ENST00000428962 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
THBS3-202ENST00000428962 POLEQ07864 2286 aa10.97□□□□□ -0.65
THBS3-202ENST00000428962 TRAV5A0A0B4J249 113 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 HTR1DP28221 377 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 DLX1P56177 255 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 TAS2R60P59551 318 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 PLGLAQ15195 96 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 TPTE2P1Q5T6R2 138 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 C11orf71Q6IPW1 123 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 OSTCQ9NRP0 149 aa10.96□□□□□ -0.65
THBS3-202ENST00000428962 TLN1Q9Y490 2541 aaKnown RBP10.96□□□□□ -0.65
THBS3-202ENST00000428962 COL6A6A6NMZ7 2263 aa10.96□□□□□ -0.66
THBS3-202ENST00000428962 C22orf46C9J442 243 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 PLA2G2AP14555 144 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 YPEL3P61236 119 aaPredicted RBP10.95□□□□□ -0.66
THBS3-202ENST00000428962 CDSNQ15517 529 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 MORN5Q5VZ52 161 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 PATE2Q6UY27 113 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 LINC00305Q7Z4B0 112 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 OR11H6Q8NGC7 330 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 SSBP3Q9BWW4 388 aaPredicted RBP10.95□□□□□ -0.66
THBS3-202ENST00000428962 FBXL15Q9H469 300 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 MRPL36Q9P0J6 103 aaKnown RBP10.95□□□□□ -0.66
THBS3-202ENST00000428962 KALRNO60229 2985 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 TEX22C9J3V5 150 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 GCGP01275 180 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 IGHV3-48P01763 117 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 SRSF12Q8WXF0 261 aaKnown RBP10.95□□□□□ -0.66
THBS3-202ENST00000428962 IGF2BP2-AS1Q96M15 143 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 DPM3Q9P2X0 92 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 CDC42EP3Q9UKI2 254 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 V9GYV3 84 aa10.95□□□□□ -0.66
THBS3-202ENST00000428962 FASNP49327 2511 aaKnown RBP10.94□□□□□ -0.66
THBS3-202ENST00000428962 LOC105371242A0A075B767 164 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 TRBV9A0A0B4J1U6 114 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 SLC17A3O00476 420 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 ISLRO14498 428 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 MOSP00540 346 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 PYYP10082 97 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 MFAP2P55001 183 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 LGALS4P56470 323 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 PRB3Q04118 309 aaPredicted RBP10.94□□□□□ -0.66
THBS3-202ENST00000428962 OR1B1Q8NGR6 318 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 FXYD5Q96DB9 178 aa10.94□□□□□ -0.66
THBS3-202ENST00000428962 J3QKU1 62 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 TIMM23O14925 209 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 HYPMO75409 117 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 AMBPP02760 352 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 PLP1P60201 277 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 COX19Q49B96 90 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 ZNF329Q86UD4 541 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 DTX2Q86UW9 622 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 OR5R1Q8NH85 324 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 TMEM18Q96B42 140 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 PEX7O00628 323 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 HIST1H1BP16401 226 aaKnown RBP10.93□□□□□ -0.66
THBS3-202ENST00000428962 ORM2P19652 201 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 OR5I1Q13606 314 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 MMDQ15546 238 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 OR1L6Q8NGR2 347 aa10.93□□□□□ -0.66
THBS3-202ENST00000428962 ANKHD1Q8IWZ3 2542 aaKnown RBP10.93□□□□□ -0.66
THBS3-202ENST00000428962 NBR2O15453 112 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 LY6HO94772 140 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 CNIH1O95406 144 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 APELAP0DMC3 54 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 MGST1P10620 155 aaKnown RBP10.92□□□□□ -0.66
THBS3-202ENST00000428962 PRTN3P24158 256 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 ARF6P62330 175 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 IBA57Q5T440 356 aaKnown RBP10.92□□□□□ -0.66
THBS3-202ENST00000428962 KIR3DL3Q8N743 410 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 MALRD1Q5VYJ5 2156 aa10.92□□□□□ -0.66
THBS3-202ENST00000428962 ZNF462Q96JM2 2506 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 SPTA1P02549 2419 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 ODF3BA8MYP8 253 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 IGLV2-8P01709 118 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 MT-ND6P03923 174 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 ADMP35318 185 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 GPR6P46095 362 aaPredicted RBP10.91□□□□□ -0.66
THBS3-202ENST00000428962 WDR73Q6P4I2 378 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 CFAP46Q8IYW2 2715 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 NAV3Q8IVL0 2385 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 JOSD1Q15040 202 aaPredicted RBP10.91□□□□□ -0.66
THBS3-202ENST00000428962 CCDC144NLQ6NUI1 221 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 C1orf122Q6ZSJ8 110 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 OR8I2Q8N0Y5 310 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 GBGT1Q8N5D6 347 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 NPBQ8NG41 125 aa10.91□□□□□ -0.66
THBS3-202ENST00000428962 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms