RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 CBY1Q9Y3M2 126 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
SNIP1-204ENST00000638725 RAI1Q7Z5J4 1906 aaPredicted RBP8.86□□□□□ -0.99
SNIP1-204ENST00000638725 E7EUB6 86 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 HSBP1O75506 76 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 IGHV3-48P01763 117 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 SELENOVP59797 346 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 RPL8P62917 257 aaKnown RBP8.86□□□□□ -0.99
SNIP1-204ENST00000638725 STUMQ69YW2 141 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 Q6ZVH6 145 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 NUP35Q8NFH5 326 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 NUDT10Q8NFP7 164 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 SARAFQ96BY9 339 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 NUDT11Q96G61 164 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 GAFA1Q96PS6 74 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 SSBP4Q9BWG4 385 aaPredicted RBP8.86□□□□□ -0.99
SNIP1-204ENST00000638725 NCOR1P1Q9H4R4 102 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 DKK4Q9UBT3 224 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 ICE1Q9Y2F5 2266 aa8.86□□□□□ -0.99
SNIP1-204ENST00000638725 HINT1P49773 126 aaPredicted RBP8.85□□□□□ -0.99
SNIP1-204ENST00000638725 EBLN2Q6P2I7 272 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 SLC25A48Q6ZT89 311 aaKnown RBP8.85□□□□□ -0.99
SNIP1-204ENST00000638725 KLHDC1Q8N7A1 406 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 OR5B3Q8NH48 314 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 BET1LQ9NYM9 111 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 RPUSD1Q9UJJ7 312 aaKnown RBP8.85□□□□□ -0.99
SNIP1-204ENST00000638725 ZFHX4Q86UP3 3567 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 ASPMQ8IZT6 3477 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 CORTO00230 105 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 TBR1Q16650 682 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 C21orf62-AS1Q17RA5 79 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 Q56UQ5 140 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 ZNF329Q86UD4 541 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 WIPF2Q8TF74 440 aaPredicted RBP8.85□□□□□ -0.99
SNIP1-204ENST00000638725 FAM222BQ8WU58 562 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 HARBI1Q96MB7 349 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 PAXXQ9BUH6 204 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 RNF7Q9UBF6 113 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 SVILO95425 2214 aa8.85□□□□□ -0.99
SNIP1-204ENST00000638725 A0A1W2PN81 502 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 M0R2Z0 102 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 DLL1O00548 723 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 PEX7O00628 323 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 COX7A2P2O60397 106 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 PLAUP00749 431 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 TSPOP30536 169 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 CAMPP49913 170 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 GNG5P63218 68 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 RNASEKQ6P5S7 137 aaKnown RBP8.84□□□□□ -0.99
SNIP1-204ENST00000638725 PATE2Q6UY27 113 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 GRAMD2BQ96HH9 432 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 SGK494Q96LW2 274 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 ZNF714Q96N38 554 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 MRPL20Q9BYC9 149 aaKnown RBP8.84□□□□□ -0.99
SNIP1-204ENST00000638725 FAM181BA6NEQ2 426 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 WT1P19544 449 aaPredicted RBP8.84□□□□□ -0.99
SNIP1-204ENST00000638725 SEM1Q6ZVN7 128 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 FNDC4Q9H6D8 234 aaPredicted RBP8.84□□□□□ -0.99
SNIP1-204ENST00000638725 NDUFA4L2Q9NRX3 87 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 TNFRSF19Q9NS68 423 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 ARFGEF3Q5TH69 2177 aa8.84□□□□□ -0.99
SNIP1-204ENST00000638725 HIGD1CA8MV81 97 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 VWC2LB2RUY7 222 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 GLRXP35754 106 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 REG1BP48304 166 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 ATP5IP56385 69 aaPredicted RBP8.84□□□□□ -1
SNIP1-204ENST00000638725 C10orf55Q5SWW7 151 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 C10orf113Q5VZT2 155 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 RASL11AQ6T310 242 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 UNQ5815/PRO19632Q6UWF5 114 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 ZNF841Q6ZN19 808 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 KIR3DL3Q8N743 410 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 NPIPB3Q92617 1050 aa8.84□□□□□ -1
SNIP1-204ENST00000638725 ALKBH7Q9BT30 221 aaPredicted RBP8.84□□□□□ -1
SNIP1-204ENST00000638725 ERHP84090 104 aaKnown RBP8.83□□□□□ -1
SNIP1-204ENST00000638725 TNFAIP6P98066 277 aaPredicted RBP8.83□□□□□ -1
SNIP1-204ENST00000638725 PMCHL1Q16048 86 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 FAM169BQ8N8A8 192 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 CACNG8Q8WXS5 425 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 SAP30LQ9HAJ7 183 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 MRPL36Q9P0J6 103 aaKnown RBP8.83□□□□□ -1
SNIP1-204ENST00000638725 ZNF788Q6ZQV5 615 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 SPATA12Q7Z6I5 190 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 LHFPL4Q7Z7J7 247 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 FXYD5Q96DB9 178 aa8.83□□□□□ -1
SNIP1-204ENST00000638725 ZNF430Q9H8G1 570 aaPredicted RBP8.83□□□□□ -1
SNIP1-204ENST00000638725 IGLV3-9A0A075B6K5 115 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 C2orf70A6NJV1 201 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 CCL25O15444 150 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 IGHV1-46P01743 117 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 IGLL1P15814 213 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 GATA4P43694 442 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 UBE2G1P62253 170 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 WT1-ASQ06250 92 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
SNIP1-204ENST00000638725 OR8B3Q8NGG8 313 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 OSR1Q8TAX0 266 aaPredicted RBP8.82□□□□□ -1
SNIP1-204ENST00000638725 OR8B2Q96RD0 313 aa8.82□□□□□ -1
SNIP1-204ENST00000638725 C7orf69Q9H7B7 122 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms