RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 TOMM20LQ6UXN7 152 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 TCF24Q7RTU0 167 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 LYG2Q86SG7 212 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 GBGT1Q8N5D6 347 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 PRRT1Q99946 306 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 TMEM222Q9H0R3 208 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 MIXL1Q9H2W2 232 aa13.29□□□□□ -0.28
PNKP-225ENST00000636214 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.29□□□□□ -0.28
PNKP-225ENST00000636214 A0A1W2PS18 150 aa13.28□□□□□ -0.28
PNKP-225ENST00000636214 RNASE2P10153 161 aaKnown RBP13.28□□□□□ -0.28
PNKP-225ENST00000636214 ALDH3B2P48448 385 aa13.28□□□□□ -0.28
PNKP-225ENST00000636214 SPCS3P61009 180 aa13.28□□□□□ -0.28
PNKP-225ENST00000636214 FAAP20Q6NZ36 180 aa13.28□□□□□ -0.28
PNKP-225ENST00000636214 APRG1Q8IVJ8 170 aa13.28□□□□□ -0.28
PNKP-225ENST00000636214 RBPMSQ93062 196 aaKnown RBP13.28□□□□□ -0.28
PNKP-225ENST00000636214 RNF183Q96D59 192 aa13.28□□□□□ -0.28
PNKP-225ENST00000636214 NAA60Q9H7X0 242 aa13.28□□□□□ -0.28
PNKP-225ENST00000636214 CCDC59Q9P031 241 aaKnown RBP13.28□□□□□ -0.28
PNKP-225ENST00000636214 CEBPZOSA8MTT3 80 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 TMEM50AO95807 157 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 HTR2BP41595 481 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 TNFRSF9Q07011 255 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 OR4C16Q8NGL9 310 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 ST8SIA2Q92186 375 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 TMEM230Q96A57 120 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 METTL26Q96S19 204 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 BCL7BQ9BQE9 202 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 HEYLQ9NQ87 328 aaPredicted RBP13.27□□□□□ -0.29
PNKP-225ENST00000636214 SCP2D1Q9UJQ7 156 aa13.27□□□□□ -0.29
PNKP-225ENST00000636214 NUPR2A6NF83 97 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 MPTX1A8MV57 137 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 CTDSPLO15194 276 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 CLN5O75503 358 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 CDS2O95674 445 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 NPPCP23582 126 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 TMEM268Q5VZI3 342 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 OR52E5Q8NH55 327 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 CSTL1Q9H114 145 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 CACNG5Q9UF02 275 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 CACFD1Q9UGQ2 172 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 RABAC1Q9UI14 185 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 KCNIP3Q9Y2W7 256 aa13.26□□□□□ -0.29
PNKP-225ENST00000636214 TRAV30A0A087WSZ9 112 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 IGHV3-66A0A0C4DH42 116 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 A0A0G2JRQ6 117 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 RPL5P46777 297 aaKnown RBP13.25□□□□□ -0.29
PNKP-225ENST00000636214 TMBIM6P55061 237 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 OR4X1Q8NH49 305 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 GLYATL2Q8WU03 294 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 RTBDNQ9BSG5 229 aaPredicted RBP13.25□□□□□ -0.29
PNKP-225ENST00000636214 VSIRQ9H7M9 311 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 ZFAND3Q9H8U3 227 aa13.25□□□□□ -0.29
PNKP-225ENST00000636214 RSL24D1Q9UHA3 163 aaKnown RBP13.25□□□□□ -0.29
PNKP-225ENST00000636214 CRYM-AS1A6NIL9 109 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 DFFBO76075 338 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 FAM90A2PQ658T7 463 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 NOXA1Q86UR1 476 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 SELENOHQ8IZQ5 122 aaKnown RBP13.24□□□□□ -0.29
PNKP-225ENST00000636214 OR51S1Q8NGJ8 323 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 GATAD1Q8WUU5 269 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 GRAMD2BQ96HH9 432 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 ZNF414Q96IQ9 312 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 MCUBQ9NWR8 336 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 GPR132Q9UNW8 380 aa13.24□□□□□ -0.29
PNKP-225ENST00000636214 TRAV2A0A0B4J234 112 aa13.23□□□□□ -0.29
PNKP-225ENST00000636214 SLC25A4P12235 298 aa13.23□□□□□ -0.29
PNKP-225ENST00000636214 EIF2B2P49770 351 aaKnown RBP13.23□□□□□ -0.29
PNKP-225ENST00000636214 PLECQ15149 4684 aaKnown RBP13.23□□□□□ -0.29
PNKP-225ENST00000636214 ZNF124Q15973 351 aa13.23□□□□□ -0.29
PNKP-225ENST00000636214 PVRIGQ6DKI7 326 aa13.23□□□□□ -0.29
PNKP-225ENST00000636214 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
PNKP-225ENST00000636214 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
PNKP-225ENST00000636214 DYNC2LI1Q8TCX1 351 aa13.23□□□□□ -0.29
PNKP-225ENST00000636214 FNDC4Q9H6D8 234 aaPredicted RBP13.23□□□□□ -0.29
PNKP-225ENST00000636214 KLK5Q9Y337 293 aaPredicted RBP13.23□□□□□ -0.29
PNKP-225ENST00000636214 A0A1B0GU03 582 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 APOHP02749 345 aaPredicted RBP13.22□□□□□ -0.29
PNKP-225ENST00000636214 SULT1A3P0DMM9 295 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 SULT1A4P0DMN0 295 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 ATF4P18848 351 aaPredicted RBP13.22□□□□□ -0.29
PNKP-225ENST00000636214 DEFB131AP59861 70 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 Q6ZRM9 215 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 STHQ8IWL8 128 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 STXBP6Q8NFX7 210 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 LHFPL5Q8TAF8 219 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 RNASEH2CQ8TDP1 164 aaKnown RBP13.22□□□□□ -0.29
PNKP-225ENST00000636214 GPR146Q96CH1 333 aa13.22□□□□□ -0.29
PNKP-225ENST00000636214 DNAH1Q9P2D7 4330 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 GSTZ1O43708 216 aaPredicted RBP13.21□□□□□ -0.29
PNKP-225ENST00000636214 ANXA3P12429 323 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 FAUP35544 74 aaKnown RBP13.21□□□□□ -0.29
PNKP-225ENST00000636214 P2RY1P47900 373 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 BSXQ3C1V8 233 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 TIGITQ495A1 244 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 AARDQ4LEZ3 155 aa13.21□□□□□ -0.29
PNKP-225ENST00000636214 C2orf83Q53S99 150 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms