RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 IGLC7A0M8Q6 106 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 CRYGCP07315 174 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 PPOXP50336 477 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 SSBP2P81877 361 aaPredicted RBP7.59□□□□□ -1.19
PDPN-212ENST00000621990 PAX2Q02962 417 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 MORN5Q5VZ52 161 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 SCNM1Q9BWG6 230 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 TPSG1Q9NRR2 321 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 RALYQ9UKM9 306 aaKnown RBP7.59□□□□□ -1.19
PDPN-212ENST00000621990 NAV3Q8IVL0 2385 aa7.59□□□□□ -1.19
PDPN-212ENST00000621990 SLC25A17O43808 307 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 GCGP01275 180 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 IGLV2-8P01709 118 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 HNF1AP20823 631 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 CASP6P55212 293 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 PKIAP61925 76 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 OR1L4Q8NGR5 311 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 OSTCQ9NRP0 149 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 TLN1Q9Y490 2541 aaKnown RBP7.58□□□□□ -1.2
PDPN-212ENST00000621990 PKDREJQ9NTG1 2253 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 IGHV2-26A0A0B4J1V2 119 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 SLC17A3O00476 420 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 ISLRO14498 428 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 ZNF90Q03938 601 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 FAM209BQ5JX69 171 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 PATE2Q6UY27 113 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 LURAP1LQ8IV03 231 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 BEND2Q8NDZ0 799 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 NPIPB3Q92617 1050 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 TMEM18Q96B42 140 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 GATCO43716 136 aaKnown RBP7.58□□□□□ -1.2
PDPN-212ENST00000621990 FAM87AP0C7U9 286 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 ERVFC1-1P60608 527 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 RPEL1Q2QD12 228 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 MRPL41Q8IXM3 137 aaKnown RBP7.58□□□□□ -1.2
PDPN-212ENST00000621990 MMD2Q8IY49 270 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 C8orf46Q8TAG6 207 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 MRPL36Q9P0J6 103 aaKnown RBP7.58□□□□□ -1.2
PDPN-212ENST00000621990 CDC42EP3Q9UKI2 254 aa7.58□□□□□ -1.2
PDPN-212ENST00000621990 TRBV9A0A0B4J1U6 114 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 COX7A2P2O60397 106 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 ADMP35318 185 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 BPIFB3P59826 476 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 UBE2L3P68036 154 aaKnown RBP7.57□□□□□ -1.2
PDPN-212ENST00000621990 OR5I1Q13606 314 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 C10orf113Q5VZT2 155 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 ETFRF1Q6IPR1 90 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 ZNF355PQ9NSJ1 428 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 TRAV5A0A0B4J249 113 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 BUB1B-PAK6H3BSN5 160 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 ZZEF1O43149 2961 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 SIAH2O43255 324 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 PLAUP00749 431 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 ESDP10768 282 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 CA7P43166 264 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 COMPP49747 757 aaPredicted RBP7.57□□□□□ -1.2
PDPN-212ENST00000621990 PRRX1P54821 245 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 MFAP2P55001 183 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 TAS2R60P59551 318 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 SUMO1P63165 101 aaKnown RBP7.57□□□□□ -1.2
PDPN-212ENST00000621990 TIGITQ495A1 244 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 TMEM116Q8NCL8 245 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 OR5AU1Q8NGC0 362 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 FXYD5Q96DB9 178 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 POLEQ07864 2286 aa7.57□□□□□ -1.2
PDPN-212ENST00000621990 IGHV1-3A0A0C4DH29 117 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 RD3LP0DJH9 198 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 MYCNOSP40205 109 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 CX3CL1P78423 397 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 C9orf152Q5JTZ5 239 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 MUC15Q8N387 334 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 TRGV9Q99603 122 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 CLEC7AQ9BXN2 247 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 GNB1LQ9BYB4 327 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 SIGLEC9Q9Y336 463 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 DCHS2Q6V1P9 2916 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 PTPRQQ9UMZ3 2332 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 C22orf46C9J442 243 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 LY6LH3BQJ8 138 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 CBLN1P23435 193 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 ZNF672Q499Z4 452 aaPredicted RBP7.56□□□□□ -1.2
PDPN-212ENST00000621990 ZNF329Q86UD4 541 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 PAXXQ9BUH6 204 aa7.56□□□□□ -1.2
PDPN-212ENST00000621990 SMIM27A0A1W2PRY6 76 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 TSTD3H0UI37 97 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 CORTO00230 105 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 RUSC1-AS1Q66K80 236 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 TMEM256Q8N2U0 113 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 LY6G5BQ8NDX9 201 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 STXBP6Q8NFX7 210 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 RNF5Q99942 180 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 MRPL18Q9H0U6 180 aaKnown RBP7.55□□□□□ -1.2
PDPN-212ENST00000621990 TP53TG3Q9ULZ0 132 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 MSRB2Q9Y3D2 182 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 IGHV3-72A0A0B4J1Y9 119 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 TEX22C9J3V5 150 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 ENSAO43768 121 aaKnown RBP7.55□□□□□ -1.2
PDPN-212ENST00000621990 REG1AP05451 166 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 PYYP10082 97 aa7.55□□□□□ -1.2
PDPN-212ENST00000621990 DDTP30046 118 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms