RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	OR4A5	Q8NH83	315 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR2AE1	Q8NHA4	323 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	R3HDM4	Q96D70	268 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	C2orf50	Q96LR7	162 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	SCGB3A2	Q96PL1	93 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	CIB3	Q96Q77	187 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	HIST1H2AA	Q96QV6	131 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	CABLES2	Q9BTV7	478 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322		A0A1W2PPQ1	181 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322		F5H5K5	113 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	SDCBP	O00560	298 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	SPINK4	O60575	86 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	YPEL1	O60688	119 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	GAPDH	P04406	335 aa	Known RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF728	P0DKX0	622 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	FOLR2	P14207	255 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	RAB4A	P20338	218 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	BLVRB	P30043	206 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	CAMLG	P49069	296 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	THBS3	P49746	956 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	RAB4B	P61018	213 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	POU2AF1	Q16633	256 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	ANXA2R	Q3ZCQ2	193 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	LCE1D	Q5T752	114 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	WDR73	Q6P4I2	378 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	SLC25A48	Q6ZT89	311 aa	Known RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	MOGAT3	Q86VF5	341 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR2D3	Q8NGH3	330 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR4D5	Q8NGN0	318 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	FAM210B	Q96KR6	192 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	YPEL2	Q96QA6	119 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	HDHD3	Q9BSH5	251 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	POLR1D	Q9Y2S0	133 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	FASN	P49327	2511 aa	Known RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	HECTD4	Q9Y4D8	3996 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	FBN1	P35555	2871 aa	Known RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322		F2Z2F3	143 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	SNAI2	O43623	268 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	CHST1	O43916	411 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	CMC4	P56277	68 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	JOSD1	Q15040	202 aa	Predicted RBP	4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	C17orf58	Q2M2W7	97 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	IL17REL	Q6ZVW7	336 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	ODF3L1	Q8IXM7	274 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR4X1	Q8NH49	305 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR9G1	Q8NH87	305 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	BTF3L4	Q96K17	158 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	C1orf123	Q9NWV4	160 aa		4.23	□□□□□ -1.73
CBWD3-215	ENST00000619322	FRAS1	Q86XX4	4008 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	IGHV2-26	A0A0B4J1V2	119 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	TRAV40	A0A0B4J280	105 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	BUB1B-PAK6	H3BSN5	160 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	IGLV2-14	P01704	120 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	SAA4	P35542	130 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	PIGY	Q3MUY2	71 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	SP6	Q3SY56	376 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	LYPD2	Q6UXB3	125 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	PLPPR1	Q8TBJ4	325 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM56	Q96MV1	263 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF714	Q96N38	554 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	CSTL1	Q9H114	145 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	C11orf68	Q9H3H3	251 aa	Known RBP	4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ST3GAL6	Q9Y274	331 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	TMEM56-RWDD3	S4R434	201 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	LRRK2	Q5S007	2527 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	CRYBG3	Q68DQ2	2970 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZFP92	A6NM28	416 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322		F6UZH7	168 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	SH2D1B	O14796	132 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ST8SIA3	O43173	380 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	PDCD6	O75340	191 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	DEFA4	P12838	97 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	AADAC	P22760	399 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	MTCP1	P56278	107 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ERVFC1-1	P60608	527 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	PNRC1	Q12796	327 aa	Predicted RBP	4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ATP6V1F	Q16864	119 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	BTNL8	Q6UX41	500 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF497	Q6ZNH5	498 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR56B2P	Q8NGI1	322 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR5D18	Q8NGL1	313 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR1N2	Q8NGR9	330 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	OR2T6	Q8NHC8	308 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	IMMP2L	Q96T52	175 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	ATP5S	Q99766	215 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	EHF	Q9NZC4	300 aa		4.22	□□□□□ -1.73
CBWD3-215	ENST00000619322	TRAV26-1	A0A087WT03	109 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	IGKV1-6	A0A0C4DH72	117 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	SYNGR1	O43759	233 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	CD5	P06127	495 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	GABRR1	P24046	479 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	CDKN1B	P46527	198 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	RAB11A	P62491	216 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	ALKBH6	Q3KRA9	238 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	ZNF429	Q86V71	674 aa		4.21	□□□□□ -1.73
CBWD3-215	ENST00000619322	GBGT1	Q8N5D6	347 aa		4.21	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms