RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 OR7C1O76099 320 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 IGF1P05019 195 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 SERPINE2P07093 398 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 P0C879 139 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PPIAL4FP0DN26 164 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 RAB4AP20338 218 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 GPR183P32249 361 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 GALR1P47211 349 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PSMB3P49720 205 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 MLF1P58340 268 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 GNB2P62879 340 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PAFAH1B2P68402 229 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 MEF2BQ02080 365 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 C6orf226Q5I0X4 101 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 ACTL10Q5JWF8 245 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PLCXD3Q63HM9 321 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 FAM71F2Q6NXP2 309 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 LCN15Q6UWW0 184 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM14EPQ6UXP3 125 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 Q6ZS52 159 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 ASCL5Q7RTU5 278 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 AAED1Q7RTV5 226 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 TMEM144Q7Z5S9 345 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 TSTD1Q8NFU3 115 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 OR2T10Q8NGZ9 312 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 OR10J5Q8NHC4 309 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 CLDN23Q96B33 292 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 S100PBPQ96BU1 408 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 OR5B12Q96R08 314 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 SMIM7Q9BQ49 75 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 SRXN1Q9BYN0 137 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 FGF23Q9GZV9 251 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PRO1933Q9H354 126 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 FNDC4Q9H6D8 234 aaPredicted RBP2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 VSIRQ9H7M9 311 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 JPT2Q9H910 190 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PLEKHA3Q9HB20 300 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 ANAPC11Q9NYG5 84 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PPIAL4AQ9Y536 164 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 MPC1Q9Y5U8 109 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PXMP4Q9Y6I8 212 aa2.98□□□□□ -1.93
SMCHD1-208ENST00000583344 PRRC2BQ5JSZ5 2229 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 IGHV3-15A0A0B4J1V0 119 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 IGHV5-10-1A0A0J9YXX1 117 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 MAP1LC3B2A6NCE7 125 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 OR5B21A6NL26 309 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 ZFP92A6NM28 416 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 RNF212BA8MTL3 300 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 G3V3Y1 287 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 H7BYZ3 331 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 M0R143 59 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 DEGS1O15121 323 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 PDE6DO43924 150 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 YPEL1O60688 119 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 KLF7O75840 302 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 HRASP01112 189 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 IGKV1-5P01602 117 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 HLA-HP01893 362 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 REG1AP05451 166 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 SERPINA7P05543 415 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 CD55P08174 381 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 RD3LP0DJH9 198 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 CCL3P10147 92 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 PSG2P11465 335 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 COX6A1P12074 109 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 SELEP16581 610 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 NPPCP23582 126 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 OR10J1P30954 320 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 ARR3P36575 388 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 RPL13AP40429 203 aaKnown RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 CDKN1BP46527 198 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 SSR4P51571 173 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 CEBPGP53567 150 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 SELENOTP62341 195 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 PAX5Q02548 391 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 TNFRSF9Q07011 255 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 EIF4EBP1Q13541 118 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 ZNF146Q15072 292 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 IQCJQ1A5X6 159 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 CEACAM16Q2WEN9 425 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 Q6P435 159 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 MOB1BQ7L9L4 216 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 SSX7Q7RTT5 188 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 H2BFWTQ7Z2G1 175 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 DEFB119Q8N690 84 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 WDR31Q8NA23 367 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 OR10G7Q8NGN6 311 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 OR5P3Q8WZ94 311 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 RAB1CQ92928 201 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 DLX4Q92988 240 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 NAT6Q93015 286 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 APOBEC3DQ96AK3 386 aaPredicted RBP2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 YPEL2Q96QA6 119 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 C20orf144Q9BQM9 153 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 RSG1Q9BU20 258 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 MAP1LC3BQ9GZQ8 125 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 OR51B6Q9H340 312 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 OR51I2Q9H344 312 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 RBKSQ9H477 322 aa2.97□□□□□ -1.93
SMCHD1-208ENST00000583344 GEMIN7Q9H840 131 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms