RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 A0A0G2JRQ6 117 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 A0A1B0GU03 582 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 RPS10-NUDT3A0A1W2PQS6 291 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 NUPR2A6NF83 97 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 INS-IGF2F8WCM5 200 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 CLN5O75503 358 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 CDS2O95674 445 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 CD74P04233 296 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 IFNA4P05014 189 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 AKAIN1P0CW23 69 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 RNASE2P10153 161 aaKnown RBP4.73□□□□□ -1.65
TCF4-228ENST00000565393 UCP1P25874 307 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 SPCS3P61009 180 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 MRPS10P82664 201 aaKnown RBP4.73□□□□□ -1.65
TCF4-228ENST00000565393 EWSR1Q01844 656 aaKnown RBP eCLIP4.73□□□□□ -1.65
TCF4-228ENST00000565393 SPCS2Q15005 226 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 TIGITQ495A1 244 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 LEMD1Q68G75 181 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 Q6ZRM9 215 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 CLVS1Q8IUQ0 354 aaPredicted RBP4.73□□□□□ -1.65
TCF4-228ENST00000565393 STHQ8IWL8 128 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 SELENOHQ8IZQ5 122 aaKnown RBP4.73□□□□□ -1.65
TCF4-228ENST00000565393 OR11H2Q8NH07 326 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 OR4X1Q8NH49 305 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 GLYATL2Q8WU03 294 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 GPR146Q96CH1 333 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 GRAMD2BQ96HH9 432 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 METTL26Q96S19 204 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 RTBDNQ9BSG5 229 aaPredicted RBP4.73□□□□□ -1.65
TCF4-228ENST00000565393 MRPS26Q9BYN8 205 aaKnown RBP4.73□□□□□ -1.65
TCF4-228ENST00000565393 TMEM222Q9H0R3 208 aa4.73□□□□□ -1.65
TCF4-228ENST00000565393 DEFB4AO15263 64 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 NXPH3O95157 252 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 CA1P00915 261 aaPredicted RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 IFNA10P01566 189 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 P0C879 139 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 SMIM18P0DKX4 95 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 AKR1C4P17516 323 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 HTR2BP41595 481 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 RPL5P46777 297 aaKnown RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 EIF2B2P49770 351 aaKnown RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 SSBP1Q04837 148 aaKnown RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 TMEM187Q14656 261 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 SURF2Q15527 256 aaPredicted RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 TMEM268Q5VZI3 342 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 ETFRF1Q6IPR1 90 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 NOXA1Q86UR1 476 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 FAM219AQ8IW50 185 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 CENPSQ8N2Z9 138 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 STXBP6Q8NFX7 210 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 OR51S1Q8NGJ8 323 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 OR52E5Q8NH55 327 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 C11orf45Q8TAV5 145 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 GATAD1Q8WUU5 269 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 RBPMSQ93062 196 aaKnown RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 ZNF414Q96IQ9 312 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 SCGB3A2Q96PL1 93 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 FNDC4Q9H6D8 234 aaPredicted RBP4.72□□□□□ -1.65
TCF4-228ENST00000565393 VSIRQ9H7M9 311 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 NAA60Q9H7X0 242 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 MCUBQ9NWR8 336 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 CACNG5Q9UF02 275 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 FBXL17Q9UF56 701 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 SCP2D1Q9UJQ7 156 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 GPR132Q9UNW8 380 aa4.72□□□□□ -1.65
TCF4-228ENST00000565393 FABP12A6NFH5 140 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 KNCNA6PVL3 124 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 CTDSPLO15194 276 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 NOL3O60936 208 aaKnown RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 RD3LP0DJH9 198 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 SLC25A4P12235 298 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 CRYBB3P26998 211 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 P2RY1P47900 373 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 ALDH3B2P48448 385 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 RND2P52198 227 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 AP2S1P53680 142 aaPredicted RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 TMBIM6P55061 237 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 DHRS2Q13268 280 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 RBMS2Q15434 407 aaKnown RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 C2orf83Q53S99 150 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 PVRIGQ6DKI7 326 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 LHFPL5Q8TAF8 219 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 RNASEH2CQ8TDP1 164 aaKnown RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 SMIM4Q8WVI0 70 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 NPIPB3Q92617 1050 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 ACY3Q96HD9 319 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 PRRT1Q99946 306 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 ZFAND3Q9H8U3 227 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 PRR13Q9NZ81 148 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 MRPL36Q9P0J6 103 aaKnown RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 RABL2AQ9UBK7 228 aaPredicted RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 CACFD1Q9UGQ2 172 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 RSL24D1Q9UHA3 163 aaKnown RBP4.71□□□□□ -1.66
TCF4-228ENST00000565393 RABL2BQ9UNT1 228 aa4.71□□□□□ -1.66
TCF4-228ENST00000565393 NBEAL2Q6ZNJ1 2754 aa4.7□□□□□ -1.66
TCF4-228ENST00000565393 TRAV2A0A0B4J234 112 aa4.7□□□□□ -1.66
TCF4-228ENST00000565393 HELTA6NFD8 242 aa4.7□□□□□ -1.66
TCF4-228ENST00000565393 CRYM-AS1A6NIL9 109 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms