RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 C19orf84I3L1E1 186 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 C8orf88P0DMB2 117 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 CDKN1AP38936 164 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 GALR1P47211 349 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 SELENOTP62341 195 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 RUSC1-AS1Q66K80 236 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 ETFRF1Q6IPR1 90 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 KIR3DL3Q8N743 410 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 FBXL15Q9H469 300 aa12.73□□□□□ -0.37
USP8-208ENST00000559329 IGHV3-48P01763 117 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 TRGC2P03986 189 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 GPR6P46095 362 aaPredicted RBP12.72□□□□□ -0.37
USP8-208ENST00000559329 ZNF90Q03938 601 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 KLRD1Q13241 179 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 C19orf35Q6ZS72 473 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 ELOVL1Q9BW60 279 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 SLC25A2Q9BXI2 301 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 DNAJC4Q9NNZ3 241 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 F11RQ9Y624 299 aaKnown RBP12.72□□□□□ -0.37
USP8-208ENST00000559329 FCN1O00602 326 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BKO60814 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 NDUFS7O75251 213 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BJP06899 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BOP23527 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BBP33778 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BDP58876 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BCP62807 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST2H2BEQ16778 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.72□□□□□ -0.37
USP8-208ENST00000559329 PATE2Q6UY27 113 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 TMEM116Q8NCL8 245 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 SRSF12Q8WXF0 261 aaKnown RBP12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BHQ93079 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 UHRF2Q96PU4 802 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BNQ99877 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 HIST1H2BMQ99879 126 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 DMRT1Q9Y5R6 373 aa12.72□□□□□ -0.37
USP8-208ENST00000559329 ARHGAP32A7KAX9 2087 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 PGPEP1LA6NFU8 196 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 C9JCJ5 164 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 CORTO00230 105 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 GGCTO75223 188 aaKnown RBP12.71□□□□□ -0.37
USP8-208ENST00000559329 SRP14P37108 136 aaKnown RBP12.71□□□□□ -0.37
USP8-208ENST00000559329 CEACAM3P40198 252 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 NECAP1Q8NC96 275 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 MISP3Q96FF7 219 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 OR5B12Q96R08 314 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 PFDN5Q99471 154 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 SRSF8Q9BRL6 282 aaKnown RBP12.71□□□□□ -0.37
USP8-208ENST00000559329 UBTD1Q9HAC8 227 aa12.71□□□□□ -0.37
USP8-208ENST00000559329 ZNF98A6NK75 572 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 OR7C2O60412 319 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 S100PP25815 95 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 ZFP36P26651 326 aaKnown RBP12.7□□□□□ -0.38
USP8-208ENST00000559329 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 NPBQ8NG41 125 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 OR1L4Q8NGR5 311 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 TRGV9Q99603 122 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 SRD5A3Q9H8P0 318 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 AURKAIP1Q9NWT8 199 aaPredicted RBP12.7□□□□□ -0.38
USP8-208ENST00000559329 LY96Q9Y6Y9 160 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 TACC2O95359 2948 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 TRAV5A0A0B4J249 113 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 A0A1W2PRE2 83 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 GGTLC3B5MD39 225 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 COX7A2P2O60397 106 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 NDUFA3O95167 84 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 EFNA4P52798 201 aa12.7□□□□□ -0.38
USP8-208ENST00000559329 TMEM8BA6NDV4 472 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 PPP1R2P9O14990 202 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 APELAP0DMC3 54 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 BPIFB3P59826 476 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 C10orf113Q5VZT2 155 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 OR5T1Q8NG75 326 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 OR4X1Q8NH49 305 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 OCC1Q8TAD7 63 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 FRZBQ92765 325 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 SFRP2Q96HF1 295 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 IMMP2LQ96T52 175 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 TNFRSF19Q9NS68 423 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 HILPDAQ9Y5L2 63 aa12.69□□□□□ -0.38
USP8-208ENST00000559329 NBR2O15453 112 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 MOSP00540 346 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 TYMSP04818 313 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 S100A8P05109 93 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 OR10J4P0C629 311 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 HOXA5P20719 270 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 MMDQ15546 238 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 FBLN7Q53RD9 439 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 VMO1Q7Z5L0 202 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 OR5AU1Q8NGC0 362 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 ZNF355PQ9NSJ1 428 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 MEOX2P50222 304 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 LGALS4P56470 323 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 EAF1Q96JC9 268 aaPredicted RBP12.68□□□□□ -0.38
USP8-208ENST00000559329 SIRPDQ9H106 197 aa12.68□□□□□ -0.38
USP8-208ENST00000559329 K7EN84 100 aa12.67□□□□□ -0.38
USP8-208ENST00000559329 TRGC1P0CF51 173 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms