RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 IGHV3-74A0A0B4J1X5 117 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 RPS10-NUDT3A0A1W2PQS6 291 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 RPL5P46777 297 aaKnown RBP9.68□□□□□ -0.86
RTN3-213ENST00000543552 SURF2Q15527 256 aaPredicted RBP9.68□□□□□ -0.86
RTN3-213ENST00000543552 PVRIGQ6DKI7 326 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 GBGT1Q8N5D6 347 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 ST8SIA2Q92186 375 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 METTL26Q96S19 204 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 ABHD1Q96SE0 405 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 MFFQ9GZY8 342 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 RABL2AQ9UBK7 228 aaPredicted RBP9.68□□□□□ -0.86
RTN3-213ENST00000543552 RABL2BQ9UNT1 228 aa9.68□□□□□ -0.86
RTN3-213ENST00000543552 TRAV30A0A087WSZ9 112 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 TEX13DA0A0J9YY54 714 aaPredicted RBP9.67□□□□□ -0.86
RTN3-213ENST00000543552 DISC1C4P0D8 188 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 CLN5O75503 358 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 TMEM50AO95807 157 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 LY6G6CO95867 125 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 RNASE2P10153 161 aaKnown RBP9.67□□□□□ -0.86
RTN3-213ENST00000543552 NPPCP23582 126 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 ETV6P41212 452 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 HTR2BP41595 481 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 EIF2B2P49770 351 aaKnown RBP9.67□□□□□ -0.86
RTN3-213ENST00000543552 SPCS3P61009 180 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 SP6Q3SY56 376 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 GPR141Q7Z602 305 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 OR4X1Q8NH49 305 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 MARCH1Q8TCQ1 289 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 GRAMD2BQ96HH9 432 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 ZNF414Q96IQ9 312 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 RARRES2Q99969 163 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 MRPS26Q9BYN8 205 aaKnown RBP9.67□□□□□ -0.86
RTN3-213ENST00000543552 NAA50Q9GZZ1 169 aaKnown RBP9.67□□□□□ -0.86
RTN3-213ENST00000543552 TMEM222Q9H0R3 208 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 MS4A6AQ9H2W1 248 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 ZFAND3Q9H8U3 227 aa9.67□□□□□ -0.86
RTN3-213ENST00000543552 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.67□□□□□ -0.86
RTN3-213ENST00000543552 CA1P00915 261 aaPredicted RBP9.66□□□□□ -0.86
RTN3-213ENST00000543552 SMIM18P0DKX4 95 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 DHODHQ02127 395 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 AARDQ4LEZ3 155 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 OR4D10Q8NGI6 311 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 OR52E5Q8NH55 327 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 SMIM4Q8WVI0 70 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 RBPMSQ93062 196 aaKnown RBP9.66□□□□□ -0.86
RTN3-213ENST00000543552 TMEM230Q96A57 120 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 PRRT1Q99946 306 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 C11orf68Q9H3H3 251 aaKnown RBP9.66□□□□□ -0.86
RTN3-213ENST00000543552 NAA60Q9H7X0 242 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 HEYLQ9NQ87 328 aaPredicted RBP9.66□□□□□ -0.86
RTN3-213ENST00000543552 RABAC1Q9UI14 185 aa9.66□□□□□ -0.86
RTN3-213ENST00000543552 CDS2O95674 445 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 OR5AC1P0C628 307 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 AKAIN1P0CW23 69 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 SLC25A4P12235 298 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
RTN3-213ENST00000543552 ZNF124Q15973 351 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 BSXQ3C1V8 233 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 TMEM41BQ5BJD5 291 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 NOXA1Q86UR1 476 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 STHQ8IWL8 128 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 OR11H2Q8NH07 326 aa9.65□□□□□ -0.86
RTN3-213ENST00000543552 IGHV3-66A0A0C4DH42 116 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 A0A1B0GU03 582 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 APOHP02749 345 aaPredicted RBP9.64□□□□□ -0.87
RTN3-213ENST00000543552 CRYBB3P26998 211 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 DEFB131AP59861 70 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 TMEM187Q14656 261 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 STXBP6Q8NFX7 210 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
RTN3-213ENST00000543552 PHLDA1Q8WV24 401 aaPredicted RBP9.64□□□□□ -0.87
RTN3-213ENST00000543552 SCGB3A2Q96PL1 93 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 MIXL1Q9H2W2 232 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 CACNG5Q9UF02 275 aa9.64□□□□□ -0.87
RTN3-213ENST00000543552 PIGBOS1A0A0B4J2F0 54 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 A0A0G2JRQ6 117 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 HELTA6NFD8 242 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 CRYM-AS1A6NIL9 109 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 CTDSPLO15194 276 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 IFNA4P05014 189 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 P2RY1P47900 373 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 IL18Q14116 193 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 RBMS2Q15434 407 aaKnown RBP9.63□□□□□ -0.87
RTN3-213ENST00000543552 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 TMEM268Q5VZI3 342 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 LEMD1Q68G75 181 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 ETFRF1Q6IPR1 90 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 SLC24A4Q8NFF2 622 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 Q8WTZ3 238 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 GLYATL2Q8WU03 294 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 RAB2BQ8WUD1 216 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 DIRAS2Q96HU8 199 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 BCL7BQ9BQE9 202 aa9.63□□□□□ -0.87
RTN3-213ENST00000543552 RTBDNQ9BSG5 229 aaPredicted RBP9.63□□□□□ -0.87
RTN3-213ENST00000543552 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
RTN3-213ENST00000543552 CCDC59Q9P031 241 aaKnown RBP9.63□□□□□ -0.87
RTN3-213ENST00000543552 KCNIP3Q9Y2W7 256 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms