RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 DYNLRB2Q8TF09 96 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 SRSF8Q9BRL6 282 aaKnown RBP11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 COMMD5Q9GZQ3 224 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 TMEM14BQ9NUH8 114 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 SIGLEC8Q9NYZ4 499 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 PEMTQ9UBM1 199 aa11.9□□□□□ -0.5
CHMP4A-207ENST00000533523 SMLR1H3BR10 107 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 MBPP02686 304 aaPredicted RBP11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 MYOD1P15172 320 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 S100A10P60903 97 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 ATP5G2Q06055 141 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 RAB32Q13637 225 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 AARDQ4LEZ3 155 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 TCTE3Q8IZS6 198 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 NECAP1Q8NC96 275 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 OR2K2Q8NGT1 345 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 OR2T35Q8NGX2 323 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 PPP1R1CQ8WVI7 109 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 SRD5A3Q9H8P0 318 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 OR51B2Q9Y5P1 312 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 DNAH6Q9C0G6 4158 aa11.89□□□□□ -0.51
CHMP4A-207ENST00000533523 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 FAM90A26D6RGX4 464 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 K7EPK0 472 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 HIST1H1BP16401 226 aaKnown RBP11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 PSMB6P28072 239 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 ID3Q02535 119 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 CD300EQ496F6 205 aaPredicted RBP11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 LRRC37A5PQ49AS3 106 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 Q5BKY6 102 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 DEFB125Q8N687 156 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 MAGT1Q9H0U3 335 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 FKBP11Q9NYL4 201 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 HSPB7Q9UBY9 170 aa11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 LSM5Q9Y4Y9 91 aaKnown RBP11.88□□□□□ -0.51
CHMP4A-207ENST00000533523 FAT2Q9NYQ8 4349 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 TRAV14DV4A0A0A6YYC5 116 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 TEX50A0A1B0GTY4 177 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 BMPR1BO00238 502 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 IFNA17P01571 189 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 PRH1P02810 166 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 CRYGCP07315 174 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 SPCS3P61009 180 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 HSPE1P61604 102 aaKnown RBP11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 POLR2GP62487 172 aaKnown RBP eCLIP11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 GUCA2BQ16661 112 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 SPINK9Q5DT21 86 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 HSD17B13Q7Z5P4 300 aaPredicted RBP11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 OR1L8Q8NGR8 309 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 OR52E5Q8NH55 327 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 RBKSQ9H477 322 aa11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 RCL1Q9Y2P8 373 aaKnown RBP11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
CHMP4A-207ENST00000533523 RBMY1BA6NDE4 496 aaKnown RBP11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 RBMY1EA6NEQ0 496 aaKnown RBP11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 CEBPZOSA8MTT3 80 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 E7EUB6 86 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 G3V3Q6 166 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 WRBO00258 174 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 CYB5BO43169 146 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 MED6O75586 246 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 OR2J3O76001 311 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 MPC2O95563 127 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 CD7P09564 240 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 RBMY1DP0C7P1 496 aaKnown RBP11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 DEFA4P12838 97 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 AREGP15514 252 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 CTRB1P17538 263 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 FGL1Q08830 312 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 CTRB2Q6GPI1 263 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 LINC00322Q6ZN03 302 aaPredicted RBP11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 OR5B3Q8NH48 314 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 HINT2Q9BX68 163 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 CACFD1Q9UGQ2 172 aa11.86□□□□□ -0.51
CHMP4A-207ENST00000533523 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 A0A1B0GW64 132 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 H0YIZ8 118 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 SYNGR2O43760 224 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 SSSCA1O60232 199 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 IAPPP10997 89 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 PRCDQ00LT1 54 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 KLK9Q2XQG4 91 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 C15orf32Q32M92 178 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 RNF126Q9BV68 326 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 OR5AC2Q9NZP5 309 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 MBD2Q9UBB5 411 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 FBXL7Q9UJT9 491 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 KLK9Q9UKQ9 250 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 DNAH2Q9P225 4427 aa11.85□□□□□ -0.51
CHMP4A-207ENST00000533523 CGB1A6NKQ9 187 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 OR11H12B2RN74 326 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 DEDDO75618 318 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 RLN2P04090 185 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 PET100P0DJ07 73 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 HOXA1P49639 335 aaPredicted RBP11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 PRSS54Q6PEW0 395 aa11.84□□□□□ -0.51
CHMP4A-207ENST00000533523 THAP6Q8TBB0 222 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms