RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 HYDINQ4G0P3 5121 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 DNASE2O00115 360 aaPredicted RBP11.69□□□□□ -0.54
CLN8-205ENST00000520991 TMEM50AO95807 157 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 AKAIN1P0CW23 69 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 RPL11P62913 178 aaKnown RBP11.69□□□□□ -0.54
CLN8-205ENST00000520991 ZNF124Q15973 351 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 CLVS1Q8IUQ0 354 aaPredicted RBP11.69□□□□□ -0.54
CLN8-205ENST00000520991 FAM219AQ8IW50 185 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 DIRAS2Q96HU8 199 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 TMEM231Q9H6L2 316 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 NAA60Q9H7X0 242 aa11.69□□□□□ -0.54
CLN8-205ENST00000520991 PLECQ15149 4684 aaKnown RBP11.69□□□□□ -0.54
CLN8-205ENST00000520991 ALMS1Q8TCU4 4167 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 IGHV3-66A0A0C4DH42 116 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 CDS2O95674 445 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 APOHP02749 345 aaPredicted RBP11.68□□□□□ -0.54
CLN8-205ENST00000520991 SPCS3P61009 180 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 SURF2Q15527 256 aaPredicted RBP11.68□□□□□ -0.54
CLN8-205ENST00000520991 PVRIGQ6DKI7 326 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 TMEM217Q8N7C4 229 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 RAB2BQ8WUD1 216 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 RBPMSQ93062 196 aaKnown RBP11.68□□□□□ -0.54
CLN8-205ENST00000520991 RTBDNQ9BSG5 229 aaPredicted RBP11.68□□□□□ -0.54
CLN8-205ENST00000520991 CSTL1Q9H114 145 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 VSIRQ9H7M9 311 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
CLN8-205ENST00000520991 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.68□□□□□ -0.54
CLN8-205ENST00000520991 A0A1B0GU03 582 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 CLN5O75503 358 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 DFFBO76075 338 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 NPPCP23582 126 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.54
CLN8-205ENST00000520991 DHODHQ02127 395 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 Q6ZRM9 215 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 OR4C16Q8NGL9 310 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 LHFPL5Q8TAF8 219 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 GLYATL2Q8WU03 294 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 PRRT1Q99946 306 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 MS4A6AQ9H2W1 248 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 FNDC4Q9H6D8 234 aaPredicted RBP11.67□□□□□ -0.54
CLN8-205ENST00000520991 CCDC59Q9P031 241 aaKnown RBP11.67□□□□□ -0.54
CLN8-205ENST00000520991 RABL2AQ9UBK7 228 aaPredicted RBP11.67□□□□□ -0.54
CLN8-205ENST00000520991 RABL2BQ9UNT1 228 aa11.67□□□□□ -0.54
CLN8-205ENST00000520991 RPS10-NUDT3A0A1W2PQS6 291 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 MPTX1A8MV57 137 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 CTDSPLO15194 276 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 HTR2BP41595 481 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 RPL5P46777 297 aaKnown RBP11.66□□□□□ -0.54
CLN8-205ENST00000520991 TMEM268Q5VZI3 342 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 SELENOHQ8IZQ5 122 aaKnown RBP11.66□□□□□ -0.54
CLN8-205ENST00000520991 LILRB2Q8N423 598 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 OR4X1Q8NH49 305 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 OR52E5Q8NH55 327 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 TMEM230Q96A57 120 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 METTL26Q96S19 204 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 HEYLQ9NQ87 328 aaPredicted RBP11.66□□□□□ -0.54
CLN8-205ENST00000520991 MRPL36Q9P0J6 103 aaKnown RBP11.66□□□□□ -0.54
CLN8-205ENST00000520991 CACNG5Q9UF02 275 aa11.66□□□□□ -0.54
CLN8-205ENST00000520991 A0A1W2PS18 150 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 CRYM-AS1A6NIL9 109 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 CEBPZOSA8MTT3 80 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 NOL3O60936 208 aaKnown RBP11.65□□□□□ -0.54
CLN8-205ENST00000520991 MLANAQ16655 118 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 BSXQ3C1V8 233 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 AARDQ4LEZ3 155 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 OR51S1Q8NGJ8 323 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 DYNC2LI1Q8TCX1 351 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 GATAD1Q8WUU5 269 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
CLN8-205ENST00000520991 BCL7BQ9BQE9 202 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 RABAC1Q9UI14 185 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 GPR132Q9UNW8 380 aa11.65□□□□□ -0.54
CLN8-205ENST00000520991 EPPK1P58107 5090 aaKnown RBP11.65□□□□□ -0.54
CLN8-205ENST00000520991 TRAV30A0A087WSZ9 112 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 TRAV2A0A0B4J234 112 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 ATF4P18848 351 aaPredicted RBP11.64□□□□□ -0.55
CLN8-205ENST00000520991 TMBIM6P55061 237 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 DEFB131AP59861 70 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 TIGITQ495A1 244 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 LINC00476Q8WZB0 136 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 GPR146Q96CH1 333 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 RSL24D1Q9UHA3 163 aaKnown RBP11.64□□□□□ -0.55
CLN8-205ENST00000520991 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
CLN8-205ENST00000520991 ANKRD20A5PA0PJZ0 165 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 CA1P00915 261 aaPredicted RBP11.63□□□□□ -0.55
CLN8-205ENST00000520991 LEMD1Q68G75 181 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 CEMP1Q6PRD7 247 aaPredicted RBP11.63□□□□□ -0.55
CLN8-205ENST00000520991 SLC24A4Q8NFF2 622 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 STXBP6Q8NFX7 210 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 RNASEH2CQ8TDP1 164 aaKnown RBP11.63□□□□□ -0.55
CLN8-205ENST00000520991 SCGB3A2Q96PL1 93 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 RARRES2Q99969 163 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 MCUBQ9NWR8 336 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 KCNIP3Q9Y2W7 256 aa11.63□□□□□ -0.55
CLN8-205ENST00000520991 KLK5Q9Y337 293 aaPredicted RBP11.63□□□□□ -0.55
CLN8-205ENST00000520991 GSTZ1O43708 216 aaPredicted RBP11.62□□□□□ -0.55
CLN8-205ENST00000520991 NXPH3O95157 252 aa11.62□□□□□ -0.55
CLN8-205ENST00000520991 LY6G6CO95867 125 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms