RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 BHLHA15Q7RTS1 189 aaPredicted RBP9.64□□□□□ -0.87
UBE3D-206ENST00000505226 FAM216BQ8N7L0 139 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
UBE3D-206ENST00000505226 LAMTOR2Q9Y2Q5 125 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 CORTO00230 105 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 CD69Q07108 199 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 PATE2Q6UY27 113 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 LHFPL4Q7Z7J7 247 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 CCL13Q99616 98 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 TP73-AS1Q9UF72 201 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 PRR33A8MZF0 331 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 REG1AP05451 166 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 RPL8P62917 257 aaKnown RBP9.64□□□□□ -0.87
UBE3D-206ENST00000505226 UBE2L3P68036 154 aaKnown RBP9.64□□□□□ -0.87
UBE3D-206ENST00000505226 RUSC1-AS1Q66K80 236 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 NUDT10Q8NFP7 164 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 NUDT11Q96G61 164 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 SGK494Q96LW2 274 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 TXN2Q99757 166 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 SLC35D1Q9NTN3 355 aa9.64□□□□□ -0.87
UBE3D-206ENST00000505226 MRPL36Q9P0J6 103 aaKnown RBP9.64□□□□□ -0.87
UBE3D-206ENST00000505226 PLXNB1O43157 2135 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 FSTL3O95633 263 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 MFAP2P55001 183 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 GAFA1Q96PS6 74 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
UBE3D-206ENST00000505226 ZZEF1O43149 2961 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 M0R1B8 84 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 TAS2R45P59539 299 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 SELENOVP59797 346 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 MZT1Q08AG7 82 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 STUMQ69YW2 141 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 FAM222BQ8WU58 562 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 URB1-AS1Q96HZ7 61 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 AMMECR1Q9Y4X0 333 aaPredicted RBP9.63□□□□□ -0.87
UBE3D-206ENST00000505226 BDP1A6H8Y1 2624 aa9.63□□□□□ -0.87
UBE3D-206ENST00000505226 CGB1A6NKQ9 187 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 CD24P25063 80 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 HNRNPA3P51991 378 aaKnown RBP9.62□□□□□ -0.87
UBE3D-206ENST00000505226 GNG5P63218 68 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 SLC25A48Q6ZT89 311 aaKnown RBP9.62□□□□□ -0.87
UBE3D-206ENST00000505226 C22orf34Q6ZV56 151 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 ZNF329Q86UD4 541 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 OR1L8Q8NGR8 309 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 ADTRPQ96IZ2 230 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 ZNF331Q9NQX6 463 aaPredicted RBP9.62□□□□□ -0.87
UBE3D-206ENST00000505226 CCL25O15444 150 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 TSPOP30536 169 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 COX19Q49B96 90 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 WIPF2Q8TF74 440 aaPredicted RBP9.62□□□□□ -0.87
UBE3D-206ENST00000505226 C7orf69Q9H7B7 122 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 NDUFA4L2Q9NRX3 87 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 TNFRSF19Q9NS68 423 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 TACC2O95359 2948 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 FAM181BA6NEQ2 426 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 PLAUP00749 431 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 HINT1P49773 126 aaPredicted RBP9.62□□□□□ -0.87
UBE3D-206ENST00000505226 C10orf55Q5SWW7 151 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 PRR27Q6MZM9 219 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 C19orf24Q9BVV8 132 aa9.62□□□□□ -0.87
UBE3D-206ENST00000505226 MRPL27Q9P0M9 148 aaKnown RBP9.62□□□□□ -0.87
UBE3D-206ENST00000505226 IGKV1D-37A0A075B6S9 117 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 REG1BP48304 166 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 KLF3P57682 345 aaPredicted RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 RPL19P84098 196 aaKnown RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 UNQ5815/PRO19632Q6UWF5 114 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 C19orf35Q6ZS72 473 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 RPRMLQ8N4K4 120 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 BORCS7Q96B45 105 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 MRPL20Q9BYC9 149 aaKnown RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 COMMD5Q9GZQ3 224 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 NCOR1P1Q9H4R4 102 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 RPUSD1Q9UJJ7 312 aaKnown RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 PROCRQ9UNN8 238 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 C2orf70A6NJV1 201 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 SH2D7A6NKC9 451 aaPredicted RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 FCN3O75636 299 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 WT1-ASQ06250 92 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 DIAPH2-AS1Q14236 149 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 TBR1Q16650 682 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 Q56UQ5 140 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 ZNF474Q6S9Z5 364 aaPredicted RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 LINC00322Q6ZN03 302 aaPredicted RBP9.61□□□□□ -0.87
UBE3D-206ENST00000505226 LINC00574Q9H8X3 128 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 BET1LQ9NYM9 111 aa9.61□□□□□ -0.87
UBE3D-206ENST00000505226 HIGD1CA8MV81 97 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 IGLL1P15814 213 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 CAMPP49913 170 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 PMCHL1Q16048 86 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 RTL8BQ17RB0 113 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 OR5B3Q8NH48 314 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 FXYD5Q96DB9 178 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 GUCD1Q96NT3 240 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 M0QZ24 198 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 PEX7O00628 323 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 FAM231DQ6ZW35 169 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 OR4F17Q8NGA8 305 aa9.6□□□□□ -0.87
UBE3D-206ENST00000505226 OR8B3Q8NGG8 313 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms