RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 ATP5G2Q06055 141 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 EBPQ15125 230 aaKnown RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 MPPED2Q15777 294 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 C12orf74Q32Q52 190 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 GUSBP11Q6P575 273 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 MKXQ8IYA7 352 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 TMEM256Q8N2U0 113 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 C12orf45Q8N5I9 185 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 Q8N9W7 124 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 OR5J2Q8NH18 312 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 OR10A6Q8NH74 314 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 CCL4L1Q8NHW4 92 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF721Q8TF20 911 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 C1orf54Q8WWF1 131 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 ITLN2Q8WWU7 325 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 ZHX1-C8orf76Q96EF9 292 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 CARD19Q96LW7 228 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 TSPAN32Q96QS1 320 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 RSPO3Q9BXY4 272 aaPredicted RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 MAP1LC3BQ9GZQ8 125 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 LRTM1Q9HBL6 345 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 TP73-AS1Q9UF72 201 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 ZNF222Q9UK12 451 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 MRPS16Q9Y3D3 137 aaKnown RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 U3KQA8 63 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 MAP1BP46821 2468 aaKnown RBP2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 RP1P56715 2156 aa2.09□□□□□ -2.07
DEPDC1-204ENST00000489862 IGSF10Q6WRI0 2623 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 PRRC2CQ9Y520 2896 aaKnown RBP2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 IGHV1-45A0A0A0MS14 117 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 TRAV8-1A0A0A6YYK1 113 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 OR4C45A6NMZ5 311 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 APOC4-APOC2K7ER74 178 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 CCL22O00626 93 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 HLA-DRB1P01911 266 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 APOC2P02655 101 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 IGHV1-8P0DP01 117 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 CNTFRP26992 372 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 DDTP30046 118 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 RPL22P35268 128 aaKnown RBP2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 INPP1P49441 399 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 GTF2A1P52655 376 aaPredicted RBP2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 LOXL1Q08397 574 aaPredicted RBP2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 DHRS2Q13268 280 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 TMEM128Q5BJH2 165 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 MORN3Q6PF18 240 aaPredicted RBP2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 Q6ZR03 302 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 LRP11Q86VZ4 500 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 C20orf196Q8IYI0 205 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 ORMDL3Q8N138 153 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 ANKRD29Q8N6D5 301 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 OR5W2Q8NH69 310 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 COQ8AQ8NI60 647 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 PDXPQ96GD0 296 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 LYSMD1Q96S90 227 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 NRTNQ99748 197 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF286AQ9HBT8 521 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 CELA1Q9UNI1 258 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 ASB4Q9Y574 426 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 APC2O95996 2303 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 SVILO95425 2214 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 COL27A1Q8IZC6 1860 aaPredicted RBP2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 PKD1L2Q7Z442 2459 aa2.09□□□□□ -2.08
DEPDC1-204ENST00000489862 LRP4O75096 1905 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 IGLV11-55A0A075B6I3 123 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 A0A087WX48 190 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 IGHV7-4-1A0A0J9YVY3 117 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 A0A0J9YY10 115 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 SPTY2D1-AS1A0A0U1RR47 76 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 SPAARA0A1B0GVQ0 90 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 A0A1B0GX78 115 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 KPNA4O00629 521 aaPredicted RBP2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 CHST10O43529 356 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 ORC5O43913 435 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 DEDDO75618 318 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 CXorf1O96002 111 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 MT-CO2P00403 227 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 IGHG2P01859 326 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 SERPINE1P05121 402 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 RPL7P18124 248 aaKnown RBP2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 CDK2P24941 298 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 NPY1RP25929 384 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF83P51522 516 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 TCTAP57738 103 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 NCALDP61601 193 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 AP1S1P61966 158 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 LTC4SQ16873 150 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 TNFAIP8L3Q5GJ75 292 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 TBPL2Q6SJ96 375 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 OOSP2Q86WS3 158 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 SGPP2Q8IWX5 399 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 BAP18Q8IXM2 172 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 ZNF101Q8IZC7 436 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 C11orf42Q8N5U0 333 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 OR11G2Q8NGC1 345 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 OR11H6Q8NGC7 330 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 OR8S1Q8NH09 359 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 OR51H1Q8NH63 302 aa2.08□□□□□ -2.08
DEPDC1-204ENST00000489862 C12orf43Q96C57 262 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms