RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CCL28Q9NRJ3 127 aa8.59□□□□□ -1.03
TRIM56-204ENST00000487252 PIGBOS1A0A0B4J2F0 54 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 KIR2DL5BA0A0G2JN68 375 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 KIR2DL5BA0A0G2JPC4 375 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 C11orf94C9JXX5 98 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 PGLYRP1O75594 196 aaPredicted RBP8.58□□□□□ -1.04
TRIM56-204ENST00000487252 TRBV12-3P01733 135 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 SLC25A6P12236 298 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 ZNF44P15621 663 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 RCC1P18754 421 aaPredicted RBP8.58□□□□□ -1.04
TRIM56-204ENST00000487252 IL3RAP26951 378 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 LINC00205P59089 165 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 NMSQ5H8A3 153 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 RPL7L1Q6DKI1 246 aaKnown RBP8.58□□□□□ -1.04
TRIM56-204ENST00000487252 EIF5AL1Q6IS14 154 aaKnown RBP8.58□□□□□ -1.04
TRIM56-204ENST00000487252 ZNF343Q6P1L6 599 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 SLC25A48Q6ZT89 311 aaKnown RBP8.58□□□□□ -1.04
TRIM56-204ENST00000487252 KIR2DL5AQ8N109 375 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 SLC35G3Q8N808 338 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 OR10J5Q8NHC4 309 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 KIR2DL5BQ8NHK3 375 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 SECTM1Q8WVN6 248 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 MARC2Q969Z3 335 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 SMIM8Q96KF7 97 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 SPIN2AQ99865 258 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 SPIN2BQ9BPZ2 258 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 RNF150Q9ULK6 438 aa8.58□□□□□ -1.04
TRIM56-204ENST00000487252 LSM5Q9Y4Y9 91 aaKnown RBP8.58□□□□□ -1.04
TRIM56-204ENST00000487252 A0A0G2JLM5 398 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 HSPB6O14558 160 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 F2RP25116 425 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 MSMO1Q15800 293 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 MRGPRG-AS1Q2M3A8 158 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 Q3ZCU0 254 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 UNQ5815/PRO19632Q6UWF5 114 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 FAM219AQ8IW50 185 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 CMTM1Q8IZ96 169 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 STPG3Q8N7X2 389 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 UBAC2Q8NBM4 344 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 ZNF439Q8NDP4 499 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 OR10V1Q8NGI7 309 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 OR1S2Q8NGQ3 325 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 TMED6Q8WW62 240 aa8.57□□□□□ -1.04
TRIM56-204ENST00000487252 TECRQ9NZ01 308 aaKnown RBP8.57□□□□□ -1.04
TRIM56-204ENST00000487252 PEF1Q9UBV8 284 aaKnown RBP8.57□□□□□ -1.04
TRIM56-204ENST00000487252 RCL1Q9Y2P8 373 aaKnown RBP8.57□□□□□ -1.04
TRIM56-204ENST00000487252 TMEM30CPA0ZSE6 113 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 TEX46H3BTG2 121 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 H3BUA1 57 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 LGALS9O00182 355 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 FCN1O00602 326 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 SLC31A2O15432 143 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 PITX3O75364 302 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 IGLV2-14P01704 120 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 S100GP29377 79 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 SULT1A2P50226 295 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 ID3Q02535 119 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 RPEL1Q2QD12 228 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 SOHLH1Q5JUK2 328 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 PPP1R27Q86WC6 154 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 LFNGQ8NES3 379 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 BSCL2Q96G97 398 aaPredicted RBP8.56□□□□□ -1.04
TRIM56-204ENST00000487252 ZNF251Q9BRH9 671 aa8.56□□□□□ -1.04
TRIM56-204ENST00000487252 IGHV4-4A0A075B6R2 117 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 C15orf65H3BRN8 121 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 SCGB1D2O95969 90 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 P0DMU3 169 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 FAM231AP0DMU4 169 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 FAM231CP0DMU5 169 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 ZNF134P52741 427 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 BLOC1S1P78537 153 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 PVRIGQ6DKI7 326 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 BPIFCQ8NFQ6 507 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 LYPD6BQ8NI32 183 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 ARL11Q969Q4 196 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 GINS3Q9BRX5 216 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 FAM103A1Q9BTL3 118 aaKnown RBP8.55□□□□□ -1.04
TRIM56-204ENST00000487252 TAF9BQ9HBM6 251 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 WFDC1Q9HC57 220 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 GFOD1Q9NXC2 390 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 OR1A1Q9P1Q5 309 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 TRAPPC2LQ9UL33 140 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 GAB2Q9UQC2 676 aa8.55□□□□□ -1.04
TRIM56-204ENST00000487252 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 A0A1B0GU03 582 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 SCO1O75880 301 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 SEC11BP0C7V7 166 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 NKX2-1P43699 371 aaPredicted RBP8.54□□□□□ -1.04
TRIM56-204ENST00000487252 TNP2Q05952 138 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 PJVKQ0ZLH3 352 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 EIF4EBP1Q13541 118 aaPredicted RBP8.54□□□□□ -1.04
TRIM56-204ENST00000487252 GNMTQ14749 295 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 C10orf91Q5T1B1 145 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 BTNL8Q6UX41 500 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 TMEM61Q8N0U2 210 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 ZBTB34Q8NCN2 500 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 SUN5Q8TC36 379 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 DYNLRB2Q8TF09 96 aa8.54□□□□□ -1.04
TRIM56-204ENST00000487252 LSM10Q969L4 123 aaKnown RBP8.54□□□□□ -1.04
TRIM56-204ENST00000487252 OR2S2Q9NQN1 319 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms