RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 UNQ6494/PRO21346Q6UXR6 183 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 OR1L6Q8NGR2 347 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 FAM167A-AS1Q96KT0 104 aa21.07■□□□□ 0.96
HLA-C-208ENST00000487245 MRPL18Q9H0U6 180 aaKnown RBP21.07■□□□□ 0.96
HLA-C-208ENST00000487245 CBLN1P23435 193 aa21.06■□□□□ 0.96
HLA-C-208ENST00000487245 PRRX1P54821 245 aa21.06■□□□□ 0.96
HLA-C-208ENST00000487245 GNB1LQ9BYB4 327 aa21.06■□□□□ 0.96
HLA-C-208ENST00000487245 ISLRO14498 428 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 PPOXP50336 477 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 PAFAH1B2P68402 229 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 DIAPH2-AS1Q14236 149 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 C11orf42Q8N5U0 333 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 LINC01560Q8TB33 94 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 IGF2BP2-AS1Q96M15 143 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 NDUFAF3Q9BU61 184 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 DNAJC4Q9NNZ3 241 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 CGB1A6NKQ9 187 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 PLAUP00749 431 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 MUC15Q8N387 334 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 THAP8Q8NA92 274 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 ST6GALNAC3Q8NDV1 305 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 SLC25A2Q9BXI2 301 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 TP53TG3Q9ULZ0 132 aa21.05■□□□□ 0.96
HLA-C-208ENST00000487245 NUPR1O60356 82 aa21.04■□□□□ 0.96
HLA-C-208ENST00000487245 IGLV2-8P01709 118 aa21.04■□□□□ 0.96
HLA-C-208ENST00000487245 Q0VG73 95 aa21.04■□□□□ 0.96
HLA-C-208ENST00000487245 KLRB1Q12918 225 aa21.04■□□□□ 0.96
HLA-C-208ENST00000487245 OR1L4Q8NGR5 311 aa21.04■□□□□ 0.96
HLA-C-208ENST00000487245 CMTM2Q8TAZ6 248 aa21.04■□□□□ 0.96
HLA-C-208ENST00000487245 ZNF430Q9H8G1 570 aaPredicted RBP21.04■□□□□ 0.96
HLA-C-208ENST00000487245 TNCP24821 2201 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 FAM90A27PA6NNH2 459 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 MT-ND6P03923 174 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 TAS2R60P59551 318 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 OR5I1Q13606 314 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 TEX45Q8NA69 505 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 OR2T6Q8NHC8 308 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 BOD1L1Q8NFC6 3051 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 CCL21O00585 134 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 RBP4P02753 201 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 CX3CL1P78423 397 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 WT1-ASQ06250 92 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 WDR73Q6P4I2 378 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 MS4A10Q96PG2 267 aa21.03■□□□□ 0.96
HLA-C-208ENST00000487245 ARFGEF3Q5TH69 2177 aa21.02■□□□□ 0.96
HLA-C-208ENST00000487245 A0A1B0GUS0 222 aa21.02■□□□□ 0.96
HLA-C-208ENST00000487245 E7EUB6 86 aa21.02■□□□□ 0.96
HLA-C-208ENST00000487245 CRISP2P16562 243 aa21.02■□□□□ 0.96
HLA-C-208ENST00000487245 SUMO1P63165 101 aaKnown RBP21.02■□□□□ 0.96
HLA-C-208ENST00000487245 ZNF672Q499Z4 452 aaPredicted RBP21.02■□□□□ 0.96
HLA-C-208ENST00000487245 MAP1BP46821 2468 aaKnown RBP21.02■□□□□ 0.96
HLA-C-208ENST00000487245 PCNX1Q96RV3 2341 aa21.02■□□□□ 0.95
HLA-C-208ENST00000487245 TCRBV4S1A1TA0A5B7 111 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 TPPP2P59282 170 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 PVRIGQ6DKI7 326 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 OR8I2Q8N0Y5 310 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 LINC00310P59036 64 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 RANP62826 216 aaKnown RBP21.01■□□□□ 0.95
HLA-C-208ENST00000487245 C2orf88Q9BSF0 95 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 FNDC4Q9H6D8 234 aaPredicted RBP21.01■□□□□ 0.95
HLA-C-208ENST00000487245 NAGKQ9UJ70 344 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 CDC42EP3Q9UKI2 254 aa21.01■□□□□ 0.95
HLA-C-208ENST00000487245 FCN1O00602 326 aa21■□□□□ 0.95
HLA-C-208ENST00000487245 SLC25A17O43808 307 aa21■□□□□ 0.95
HLA-C-208ENST00000487245 IER3P46695 156 aa21■□□□□ 0.95
HLA-C-208ENST00000487245 ZNF841Q6ZN19 808 aa21■□□□□ 0.95
HLA-C-208ENST00000487245 IGHV2-26A0A0B4J1V2 119 aa20.99■□□□□ 0.95
HLA-C-208ENST00000487245 GRIFINA4D1Z8 144 aa20.99■□□□□ 0.95
HLA-C-208ENST00000487245 ENSAO43768 121 aaKnown RBP20.99■□□□□ 0.95
HLA-C-208ENST00000487245 BPIFB3P59826 476 aa20.99■□□□□ 0.95
HLA-C-208ENST00000487245 UBE2L3P68036 154 aaKnown RBP20.99■□□□□ 0.95
HLA-C-208ENST00000487245 IGKV1D-37A0A075B6S9 117 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 SMIM27A0A1W2PRY6 76 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 SNURFLB1AK76 121 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 COX7A2P2O60397 106 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 IGLV1-47P01700 117 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 C10orf113Q5VZT2 155 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 OR5AU1Q8NGC0 362 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 CLEC7AQ9BXN2 247 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 SCGB1D1O95968 90 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 C1orf194Q5T5A4 169 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 MORN5Q5VZ52 161 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 ETFRF1Q6IPR1 90 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 C8orf46Q8TAG6 207 aa20.98■□□□□ 0.95
HLA-C-208ENST00000487245 MRGPRG-AS1Q2M3A8 158 aa20.97■□□□□ 0.95
HLA-C-208ENST00000487245 PATE2Q6UY27 113 aa20.97■□□□□ 0.95
HLA-C-208ENST00000487245 RNASE7Q9H1E1 156 aaKnown RBP20.97■□□□□ 0.95
HLA-C-208ENST00000487245 RAXQ9Y2V3 346 aa20.97■□□□□ 0.95
HLA-C-208ENST00000487245 AMMECR1Q9Y4X0 333 aaPredicted RBP20.97■□□□□ 0.95
HLA-C-208ENST00000487245 ROS1P08922 2347 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 TRAV5A0A0B4J249 113 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 KIR2DL5BA0A0G2JN68 375 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 KIR2DL5BA0A0G2JPC4 375 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 CRYGCP07315 174 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 SSBP2P81877 361 aaPredicted RBP20.96■□□□□ 0.95
HLA-C-208ENST00000487245 C10orf55Q5SWW7 151 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 ZNF600Q6ZNG1 722 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 KIR2DL5AQ8N109 375 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 NPIPB3Q92617 1050 aa20.96■□□□□ 0.95
HLA-C-208ENST00000487245 PAXXQ9BUH6 204 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms