RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TMEM222Q9H0R3 208 aa16.78■□□□□ 0.28
PTPN4-207ENST00000460162 TMEM231Q9H6L2 316 aa16.78■□□□□ 0.28
PTPN4-207ENST00000460162 TRAV2A0A0B4J234 112 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 MPTX1A8MV57 137 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 RGS5O15539 181 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 TMEM50AO95807 157 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 OPRK1P41145 380 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 ETV6P41212 452 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 SURF2Q15527 256 aaPredicted RBP16.77■□□□□ 0.28
PTPN4-207ENST00000460162 BSXQ3C1V8 233 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 AARDQ4LEZ3 155 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 GBGT1Q8N5D6 347 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 GATAD1Q8WUU5 269 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 MRPS26Q9BYN8 205 aaKnown RBP16.77■□□□□ 0.28
PTPN4-207ENST00000460162 CSTL1Q9H114 145 aa16.77■□□□□ 0.28
PTPN4-207ENST00000460162 C14orf166Q9Y224 244 aaKnown RBP16.77■□□□□ 0.28
PTPN4-207ENST00000460162 RPL5P46777 297 aaKnown RBP16.76■□□□□ 0.27
PTPN4-207ENST00000460162 CEMP1Q6PRD7 247 aaPredicted RBP16.76■□□□□ 0.27
PTPN4-207ENST00000460162 GPR141Q7Z602 305 aa16.76■□□□□ 0.27
PTPN4-207ENST00000460162 SMIM4Q8WVI0 70 aa16.76■□□□□ 0.27
PTPN4-207ENST00000460162 A0A1B0GU03 582 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 CLN5O75503 358 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 DFFBO76075 338 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 CDS2O95674 445 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 APOHP02749 345 aaPredicted RBP16.75■□□□□ 0.27
PTPN4-207ENST00000460162 OR5AC1P0C628 307 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 FAAP20Q6NZ36 180 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 OR4X1Q8NH49 305 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 RBPMSQ93062 196 aaKnown RBP16.75■□□□□ 0.27
PTPN4-207ENST00000460162 MS4A6AQ9H2W1 248 aa16.75■□□□□ 0.27
PTPN4-207ENST00000460162 FNDC4Q9H6D8 234 aaPredicted RBP16.75■□□□□ 0.27
PTPN4-207ENST00000460162 DISC1C4P0D8 188 aa16.74■□□□□ 0.27
PTPN4-207ENST00000460162 ALDH3B2P48448 385 aa16.74■□□□□ 0.27
PTPN4-207ENST00000460162 SPCS3P61009 180 aa16.74■□□□□ 0.27
PTPN4-207ENST00000460162 OR52E5Q8NH55 327 aa16.74■□□□□ 0.27
PTPN4-207ENST00000460162 NAA60Q9H7X0 242 aa16.74■□□□□ 0.27
PTPN4-207ENST00000460162 MRPL36Q9P0J6 103 aaKnown RBP16.74■□□□□ 0.27
PTPN4-207ENST00000460162 KLK5Q9Y337 293 aaPredicted RBP16.74■□□□□ 0.27
PTPN4-207ENST00000460162 TEX13DA0A0J9YY54 714 aaPredicted RBP16.73■□□□□ 0.27
PTPN4-207ENST00000460162 A0A1W2PS18 150 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 DNASE2O00115 360 aaPredicted RBP16.73■□□□□ 0.27
PTPN4-207ENST00000460162 HTR2BP41595 481 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 Q6ZRM9 215 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 LILRB2Q8N423 598 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 LHFPL5Q8TAF8 219 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 GLYATL2Q8WU03 294 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 METTL26Q96S19 204 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 RTBDNQ9BSG5 229 aaPredicted RBP16.73■□□□□ 0.27
PTPN4-207ENST00000460162 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.73■□□□□ 0.27
PTPN4-207ENST00000460162 RABL2AQ9UBK7 228 aaPredicted RBP16.73■□□□□ 0.27
PTPN4-207ENST00000460162 RABL2BQ9UNT1 228 aa16.73■□□□□ 0.27
PTPN4-207ENST00000460162 IGHV3-66A0A0C4DH42 116 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 RPS10-NUDT3A0A1W2PQS6 291 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 CTDSP2O14595 271 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 CTDSPLO15194 276 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 AKAIN1P0CW23 69 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 NPPCP23582 126 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 RPL11P62913 178 aaKnown RBP16.72■□□□□ 0.27
PTPN4-207ENST00000460162 DHODHQ02127 395 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 SPCS2Q15005 226 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 RARRES2Q99969 163 aa16.72■□□□□ 0.27
PTPN4-207ENST00000460162 C11orf68Q9H3H3 251 aaKnown RBP16.72■□□□□ 0.27
PTPN4-207ENST00000460162 TRAV30A0A087WSZ9 112 aa16.71■□□□□ 0.27
PTPN4-207ENST00000460162 LY6G6CO95867 125 aa16.71■□□□□ 0.27
PTPN4-207ENST00000460162 DEFB131AP59861 70 aa16.71■□□□□ 0.27
PTPN4-207ENST00000460162 OR4C16Q8NGL9 310 aa16.71■□□□□ 0.27
PTPN4-207ENST00000460162 PRRT1Q99946 306 aa16.71■□□□□ 0.27
PTPN4-207ENST00000460162 CCDC59Q9P031 241 aaKnown RBP16.71■□□□□ 0.27
PTPN4-207ENST00000460162 CACNG5Q9UF02 275 aa16.71■□□□□ 0.27
PTPN4-207ENST00000460162 CRYM-AS1A6NIL9 109 aa16.7■□□□□ 0.26
PTPN4-207ENST00000460162 CA1P00915 261 aaPredicted RBP16.7■□□□□ 0.26
PTPN4-207ENST00000460162 CRYBB3P26998 211 aa16.7■□□□□ 0.26
PTPN4-207ENST00000460162 IL18Q14116 193 aa16.7■□□□□ 0.26
PTPN4-207ENST00000460162 RAB2BQ8WUD1 216 aa16.7■□□□□ 0.26
PTPN4-207ENST00000460162 NARS2Q96I59 477 aaKnown RBP16.7■□□□□ 0.26
PTPN4-207ENST00000460162 RABAC1Q9UI14 185 aa16.7■□□□□ 0.26
PTPN4-207ENST00000460162 IGKV1-17P01599 117 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 P2RY1P47900 373 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 C2orf83Q53S99 150 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 TMEM268Q5VZI3 342 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 LEMD1Q68G75 181 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 SELENOHQ8IZQ5 122 aaKnown RBP16.69■□□□□ 0.26
PTPN4-207ENST00000460162 FAM24BQ8N5W8 94 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 SLC24A4Q8NFF2 622 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 RNASEH2CQ8TDP1 164 aaKnown RBP16.69■□□□□ 0.26
PTPN4-207ENST00000460162 TMEM230Q96A57 120 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 DIRAS2Q96HU8 199 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 BCL7BQ9BQE9 202 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 HEYLQ9NQ87 328 aaPredicted RBP16.69■□□□□ 0.26
PTPN4-207ENST00000460162 CACFD1Q9UGQ2 172 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 GPR132Q9UNW8 380 aa16.69■□□□□ 0.26
PTPN4-207ENST00000460162 SLC25A4P12235 298 aa16.68■□□□□ 0.26
PTPN4-207ENST00000460162 MLANAQ16655 118 aa16.68■□□□□ 0.26
PTPN4-207ENST00000460162 OR11H2Q8NH07 326 aa16.68■□□□□ 0.26
PTPN4-207ENST00000460162 PHLDA1Q8WV24 401 aaPredicted RBP16.68■□□□□ 0.26
PTPN4-207ENST00000460162 GRAMD2BQ96HH9 432 aa16.68■□□□□ 0.26
PTPN4-207ENST00000460162 MFFQ9GZY8 342 aa16.68■□□□□ 0.26
PTPN4-207ENST00000460162 IGLC1P0CG04 106 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 TMEM187Q14656 261 aa16.67■□□□□ 0.26
PTPN4-207ENST00000460162 TIGITQ495A1 244 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms