RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GNG5P63218 68 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 OR52E5Q8NH55 327 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZNF355PQ9NSJ1 428 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZZEF1O43149 2961 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 IGHV3-35A0A0C4DH35 117 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 MMDQ15546 238 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM144Q7Z5S9 345 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 PAXXQ9BUH6 204 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 DNAJC4Q9NNZ3 241 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM167BQ9NRX6 74 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 ELOVL5Q9NYP7 299 aa8.49□□□□□ -1.05
CPSF1P1-201ENST00000397477 PPIAL4CA0A0B4J2A2 164 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 DLL1O00548 723 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 PPIAL4GP0DN37 164 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 GATA4P43694 442 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 DMRTC2Q8IXT2 367 aaPredicted RBP8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 Q8NA96 180 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 VSTM2AQ8TAG5 236 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 DDB2Q92466 427 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 MS4A10Q96PG2 267 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 PARD6GQ9BYG4 376 aaPredicted RBP8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 IGHV3OR16-8A0A075B7F1 116 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 A0A087X0M5 115 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 A0A1B0GX30 115 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 C8orf88P0DMB2 117 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 CRISP2P16562 243 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 RPL27AP46776 148 aaKnown RBP8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 RPEL1Q2QD12 228 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 OR5B3Q8NH48 314 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 SLC25A33Q9BSK2 321 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 SEBOXQ9HB31 216 aaPredicted RBP8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 TNFRSF19Q9NS68 423 aa8.48□□□□□ -1.05
CPSF1P1-201ENST00000397477 IGKV1OR2-108A0A075B7D4 117 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 AMBPP02760 352 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 AREGP15514 252 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 USF1P22415 310 aaPredicted RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 BPIFB3P59826 476 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 KRTDAPP60985 99 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 CD69Q07108 199 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 MORN5Q5VZ52 161 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM183AQ8IXX5 376 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 MMD2Q8IY49 270 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 OSR1Q8TAX0 266 aaPredicted RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 ASCL2Q99929 193 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 A0A1W2PN81 502 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 IGHV2-70P01814 119 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 FRMD6-AS1P0C7T7 363 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 RNASE2P10153 161 aaKnown RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 APOBEC3AP31941 199 aaPredicted RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 SRP14P37108 136 aaKnown RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 RPL29P47914 159 aaKnown RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 TEX38Q6PEX7 206 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 CENPVQ7Z7K6 275 aaPredicted RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZNF439Q8NDP4 499 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 VENTXO95231 258 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 PRRX1P54821 245 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 WT1-ASQ06250 92 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 TOMM20LQ6UXN7 152 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 LINC00305Q7Z4B0 112 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 DIRC2Q96SL1 478 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 MRPL18Q9H0U6 180 aaKnown RBP8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM242Q9NWH2 141 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZFYVE26Q68DK2 2539 aa8.47□□□□□ -1.05
CPSF1P1-201ENST00000397477 CGB3P0DN86 165 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 CGB7P0DN87 165 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 ADMP35318 185 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 PPOXP50336 477 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 KLF17Q5JT82 389 aaPredicted RBP8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZNF331Q9NQX6 463 aaPredicted RBP8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 PGPA6NDG6 321 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 ZNF705AQ6ZN79 300 aaPredicted RBP8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 NUP37Q8NFH4 326 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 TMEM186Q96B77 213 aa8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 EAF1Q96JC9 268 aaPredicted RBP8.46□□□□□ -1.05
CPSF1P1-201ENST00000397477 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
CPSF1P1-201ENST00000397477 IGHV1-8P0DP01 117 aa8.46□□□□□ -1.06
CPSF1P1-201ENST00000397477 LOXP28300 417 aaPredicted RBP8.46□□□□□ -1.06
CPSF1P1-201ENST00000397477 VWC2Q2TAL6 325 aa8.46□□□□□ -1.06
CPSF1P1-201ENST00000397477 IBA57Q5T440 356 aaKnown RBP8.46□□□□□ -1.06
CPSF1P1-201ENST00000397477 AMMECR1Q9Y4X0 333 aaPredicted RBP8.46□□□□□ -1.06
CPSF1P1-201ENST00000397477 FAM90A9PA6NNJ1 464 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 H0Y8G0 127 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 MEF2CQ06413 473 aaPredicted RBP8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 KLRD1Q13241 179 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 PDPNQ86YL7 162 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 DAZAP1Q96EP5 407 aaKnown RBP8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 ATG101Q9BSB4 218 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 DMRT1Q9Y5R6 373 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 SPENQ96T58 3664 aaKnown RBP8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 LY6DQ14210 128 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 FAM222BQ8WU58 562 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 TMEM133Q9H2Q1 129 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 FNDC4Q9H6D8 234 aaPredicted RBP8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 CSPG4Q6UVK1 2322 aa8.45□□□□□ -1.06
CPSF1P1-201ENST00000397477 Q8N7P7 452 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms