RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 LGALS4P56470 323 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 GNMTQ14749 295 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF585BQ52M93 769 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 OR2H1Q9GZK4 316 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 PATZ1Q9HBE1 687 aaKnown RBP5.61□□□□□ -1.51
CSDE1-204ENST00000369530 SCRT2Q9NQ03 307 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 VWFP04275 2813 aa5.61□□□□□ -1.51
CSDE1-204ENST00000369530 KLF5Q13887 457 aaPredicted RBP5.6□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF841Q6ZN19 808 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 C9orf139Q6ZV77 190 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 NECAP1Q8NC96 275 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 WFDC11Q8NEX6 87 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 MRPL30Q8TCC3 161 aaKnown RBP5.6□□□□□ -1.51
CSDE1-204ENST00000369530 PKIBQ9C010 78 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 MRPL18Q9H0U6 180 aaKnown RBP5.6□□□□□ -1.51
CSDE1-204ENST00000369530 MS4A6AQ9H2W1 248 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 PROCRQ9UNN8 238 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 IGHV3-13P01766 116 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 CCL1P22362 96 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 GNG4P50150 75 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 DYNLT3P51808 116 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 PAX9P55771 341 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 FXYD4P59646 89 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 TGFBR3Q03167 851 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 FAM78BQ5VT40 261 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 C1QL2Q7Z5L3 287 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 RTN4RL2Q86UN3 420 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 Q8TCH9 128 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 GNB4Q9HAV0 340 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 HIF1ANQ9NWT6 349 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 MUC21A0A0G2JKD1 596 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 MUC21A0A140T8X8 626 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 A1L4Q6 167 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 C2orf70A6NJV1 201 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 ZNF737O75373 536 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 PIGPP57054 158 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 SRSF7Q16629 238 aaKnown RBP eCLIP5.6□□□□□ -1.51
CSDE1-204ENST00000369530 MUC21Q5SSG8 566 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 LHFPL2Q6ZUX7 228 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 C6orf201Q7Z4U5 140 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 HAPLN4Q86UW8 402 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 PP6455Q8WZ26 134 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 JMJD8Q96S16 334 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 TXNDC17Q9BRA2 123 aa5.6□□□□□ -1.51
CSDE1-204ENST00000369530 WDR61Q9GZS3 305 aaKnown RBP5.6□□□□□ -1.51
CSDE1-204ENST00000369530 RYR2Q92736 4967 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 FLNAP21333 2647 aaKnown RBP5.59□□□□□ -1.51
CSDE1-204ENST00000369530 A0A1B0GV50 99 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 FAM24AA6NFZ4 105 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 KRTDAPP60985 99 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 TMEM42Q69YG0 159 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 OR8I2Q8N0Y5 310 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 OR5C1Q8NGR4 320 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 GALMQ96C23 342 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 TMEM140Q9NV12 185 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 IL36BQ9NZH7 164 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 PKDREJQ9NTG1 2253 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 FBN3Q75N90 2809 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 PLECQ15149 4684 aaKnown RBP5.59□□□□□ -1.51
CSDE1-204ENST00000369530 XRCC2O43543 280 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 PF4V1P10720 104 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 LRRC75BQ2VPJ9 315 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 CLEC7AQ9BXN2 247 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 SAMD10Q9BYL1 202 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 TAAR3PQ9P1P4 343 aa5.59□□□□□ -1.51
CSDE1-204ENST00000369530 IGKV1-9A0A0C4DH69 117 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 GRIFINA4D1Z8 144 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 CEBPZOSA8MTT3 80 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 K7EQM0 130 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 NGFP01138 241 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 LTC4SQ16873 150 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 FA2HQ7L5A8 372 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 LYZL2Q7Z4W2 148 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 OR10G9Q8NGN4 311 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 LYZL4Q96KX0 146 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 SPIN2AQ99865 258 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 SPIN2BQ9BPZ2 258 aa5.59□□□□□ -1.52
CSDE1-204ENST00000369530 PKD1P98161 4303 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 FAM231BA6NCW3 169 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 ZFP92A6NM28 416 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 CD300LBA8K4G0 201 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 F2Z2F3 143 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 COX6B1P14854 86 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 NPPCP23582 126 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 S100GP29377 79 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 LMO4P61968 165 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 HERV-K104P63124 156 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 NMSQ5H8A3 153 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 TSKUQ8WUA8 353 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 NEIL1Q96FI4 390 aaPredicted RBP5.58□□□□□ -1.52
CSDE1-204ENST00000369530 ABCA4P78363 2273 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 A6NDN8 102 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 FAM90A27PA6NNH2 459 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 PDE6DO43924 150 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 RBMXL2O75526 392 aaKnown RBP5.58□□□□□ -1.52
CSDE1-204ENST00000369530 TMEM50AO95807 157 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 NUDT3O95989 172 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 OR9G9P0C7N8 305 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 CFHR2P36980 270 aa5.58□□□□□ -1.52
CSDE1-204ENST00000369530 PLP1P60201 277 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms