RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 DPPA2Q7Z7J5 298 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 NDUFA11Q86Y39 141 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 MUC15Q8N387 334 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 DEFB125Q8N687 156 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 NATD1Q8N6N6 113 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 OR4E2Q8NGC2 313 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 OR4X1Q8NH49 305 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM57AQ8TBR7 257 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 LMX1AQ8TE12 382 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 MAFIPQ8WZ33 124 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TFGQ92734 400 aaPredicted RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 CAPZA3Q96KX2 299 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 OLFM3Q96PB7 478 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 EBNA1BP2Q99848 306 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 UTP23Q9BRU9 249 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SIKE1Q9BRV8 207 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 CHID1Q9BWS9 393 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 EBPLQ9BY08 206 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 NDEL1Q9GZM8 345 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 C20orf27Q9GZN8 174 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM96AQ9H5X1 160 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 VSIRQ9H7M9 311 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 TMBIM4Q9HC24 238 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM60AQ9NP50 221 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 C8orf4Q9NR00 106 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 BABAM2Q9NXR7 383 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 MRM2Q9UI43 246 aaKnown RBP0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 SCML1Q9UN30 329 aa0.55□□□□□ -2.32
CCDC144A-201ENST00000328495 OR5H14A6NHG9 310 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 K7EQS6 105 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 UBE2L6O14933 153 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 STX10O60499 249 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PDCD6O75340 191 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ATG12O94817 140 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 NSA2O95478 260 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PTTG1O95997 202 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IGKV1-16P04430 117 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SMIM10L2AP0DMW4 78 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SMIM10L2BP0DMW5 78 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CD28P10747 220 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CFL1P23528 166 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OPRM1P35372 400 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 HINT1P49773 126 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TPPP2P59282 170 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 MRPS15P82914 257 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 POU6F1Q14863 301 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TAL2Q16559 108 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TNFAIP8L3Q5GJ75 292 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM42Q69YG0 159 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TMED4Q7Z7H5 227 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 GALNT10Q86SR1 603 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 Q86TA4 180 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 STX12Q86Y82 276 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SYCE1Q8N0S2 351 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 GAPTQ8N292 157 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 C2orf73Q8N5S3 287 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR4C13Q8NGP0 309 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR13D1Q8NGV5 346 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR8S1Q8NH09 359 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 MFSD8Q8NHS3 518 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ANKRD7Q92527 254 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TESCQ96BS2 214 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 DDIT4LQ96D03 193 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CMBLQ96DG6 245 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 DNAJC30Q96LL9 226 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR8B2Q96RD0 313 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ARL6Q9H0F7 186 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 METTL9Q9H1A3 318 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 RPRMQ9NS64 109 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 TMEM100Q9NV29 134 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PAQR5Q9NXK6 330 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 AHSPQ9NZD4 102 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 MCM3APO60318 1980 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A0B4J2C4 111 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A0G2JMM0 328 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A1W2PPB8 328 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 A0A1W2PRS3 328 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 IZUMO1RA6ND01 250 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 FAM183AA6NL82 134 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 A8MWP6 167 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 KIR3DP1A8MWS1 328 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 LY6LH3BQJ8 138 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PSMD12O00232 456 aaPredicted RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 ZW10O43264 779 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 STK16O75716 305 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PDYNP01213 254 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 APOEP02649 317 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 PAEPP09466 180 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 CPMP14384 443 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 GABRA3P34903 492 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 LPAR6P43657 344 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 INPP1P49441 399 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SRP9P49458 86 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 KRTAP12-1P59990 96 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 GABARAPL2P60520 117 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 FGF12P61328 243 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 SLC35A2P78381 396 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 EMX2Q04743 252 aa0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 KRR1Q13601 381 aaKnown RBP0.54□□□□□ -2.32
CCDC144A-201ENST00000328495 OR2F1Q13607 317 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms