RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 LYNX1P0DP58 116 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 PRAMEF5Q5TYX0 476 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 NIT1Q86X76 327 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 FAM216BQ8N7L0 139 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 STPG3Q8N7X2 389 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 SLC35E1Q96K37 410 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 HEYLQ9NQ87 328 aaPredicted RBP12.92□□□□□ -0.34
USH1C-202ENST00000318024 ZNF586Q9NXT0 402 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 ARFGEF3Q5TH69 2177 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 RHOBP62745 196 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 MMDQ15546 238 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 LTC4SQ16873 150 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 STUMQ69YW2 141 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 STPG4Q8N801 248 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 FAM222BQ8WU58 562 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 KCNS1Q96KK3 526 aa12.92□□□□□ -0.34
USH1C-202ENST00000318024 A0A1W2PPR1 153 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 ZNF253O75346 499 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 HYPMO75409 117 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 LINC00869P0C866 280 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 BATFQ16520 125 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 SPATA45Q537H7 98 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 OR4A16Q8NH70 328 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 OSTCQ9NRP0 149 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 TCF19Q9Y242 345 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 DSCAMO60469 2012 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 ZNF462Q96JM2 2506 aa12.91□□□□□ -0.34
USH1C-202ENST00000318024 IGLV2-8P01709 118 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 KRTDAPP60985 99 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 WDR73Q6P4I2 378 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 VKORC1L1Q8N0U8 176 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 UHRF2Q96PU4 802 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 SLC25A10Q9UBX3 287 aaPredicted RBP12.9□□□□□ -0.34
USH1C-202ENST00000318024 TMEM178BH3BS89 294 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 BMPR1BO00238 502 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 LY6HO94772 140 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 PRRX1P54821 245 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 CENPWQ5EE01 88 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 TEPPQ6URK8 271 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 C11orf42Q8N5U0 333 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 DDB2Q92466 427 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 ZNF503Q96F45 646 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 GAFA1Q96PS6 74 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 FAM103A1Q9BTL3 118 aaKnown RBP12.9□□□□□ -0.34
USH1C-202ENST00000318024 DNAJC4Q9NNZ3 241 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 UQCR10Q9UDW1 63 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 NAT8BQ9UHF3 227 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 PPIAL4AQ9Y536 164 aa12.9□□□□□ -0.34
USH1C-202ENST00000318024 MGST3O14880 152 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 ZNF324O75467 553 aaPredicted RBP12.89□□□□□ -0.35
USH1C-202ENST00000318024 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 GPR12P47775 334 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 COX19Q49B96 90 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 MORN2Q502X0 79 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 OR4P4Q8NGL7 312 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 FAM216AQ8WUB2 273 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 CHTOPQ9Y3Y2 248 aaKnown RBP12.89□□□□□ -0.35
USH1C-202ENST00000318024 PPIAL4EA0A075B759 164 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 IGHV1-69-2A0A0G2JMI3 117 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 PPIAL4DF5H284 164 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 MT-CO2P00403 227 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 IGHV3-7P01780 117 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 OR5G3P0C626 314 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 PPIAL4FP0DN26 164 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 AMTP48728 403 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 CR1LQ2VPA4 569 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 KIAA1644Q3SXP7 199 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 TEX36Q5VZQ5 186 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
USH1C-202ENST00000318024 PPP1R35Q8TAP8 253 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 TMEM140Q9NV12 185 aa12.89□□□□□ -0.35
USH1C-202ENST00000318024 MYO18BQ8IUG5 2567 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 SMIM27A0A1W2PRY6 76 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 ISLRO14498 428 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 SUMO1P63165 101 aaKnown RBP12.88□□□□□ -0.35
USH1C-202ENST00000318024 TRAT1Q6PIZ9 186 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 ZNF843Q8N446 348 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 RNASE7Q9H1E1 156 aaKnown RBP12.88□□□□□ -0.35
USH1C-202ENST00000318024 HELTA6NFD8 242 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 FNDC10F2Z333 226 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 SPINT2O43291 252 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 CRYBB3P26998 211 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 GNG4P50150 75 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 ZNF134P52741 427 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 LYPD2Q6UXB3 125 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 PQLC2Q6ZP29 291 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 IFI27L2Q9H2X8 130 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 LAMTOR2Q9Y2Q5 125 aa12.88□□□□□ -0.35
USH1C-202ENST00000318024 ASH1LQ9NR48 2969 aaKnown RBP12.87□□□□□ -0.35
USH1C-202ENST00000318024 C15orf61A6NNL5 157 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 M0R1X1 148 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 IGFBP2P18065 325 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 GNG10P50151 68 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 LOXL3P58215 753 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 RPL39P5Q59GN2 51 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 TSKUQ8WUA8 353 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 IGF2BP2-AS1Q96M15 143 aa12.87□□□□□ -0.35
USH1C-202ENST00000318024 JPT1Q9UK76 154 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms