RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 MRPL36Q9P0J6 103 aaKnown RBP9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 S4R3C0 116 aa9.77□□□□□ -0.85
CHMP2A-201ENST00000312547 RPS10-NUDT3A0A1W2PQS6 291 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 IGSF23A1L1A6 192 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 CCNKO75909 580 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 SLC25A4P12235 298 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 OPRK1P41145 380 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 ARL16Q0P5N6 197 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 FAM209BQ5JX69 171 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 C8orf86Q6ZUL3 223 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 SLC16A13Q7RTY0 426 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 OR5B12Q96R08 314 aa9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 RANGRFQ9HD47 186 aaPredicted RBP9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 PAIP2BQ9ULR5 123 aaKnown RBP9.76□□□□□ -0.85
CHMP2A-201ENST00000312547 A0A1W2PRX2 142 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 NUDT19A8MXV4 375 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 TRBV12-3P01733 135 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 IGHV3-48P01763 117 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 IGHV3-23P01764 117 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 SULT1A1P50225 295 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 MFAP4P55083 255 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 NSUN5P1Q3KNT7 163 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 ETFRF1Q6IPR1 90 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 TMEM116Q8NCL8 245 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 OR4X1Q8NH49 305 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 THAP6Q8TBB0 222 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 TXN2Q99757 166 aa9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 PEF1Q9UBV8 284 aaKnown RBP9.75□□□□□ -0.85
CHMP2A-201ENST00000312547 BMPR1BO00238 502 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 SCAF4O95104 1147 aaKnown RBP9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 HSPB1P04792 205 aaKnown RBP9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 CLEC3BP05452 202 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 DLK1P80370 383 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 EWSR1Q01844 656 aaKnown RBP eCLIP9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 FHL3Q13643 280 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 GAMTQ14353 236 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 DEFB136Q30KP8 78 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 OR8G2PQ6IF36 304 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 ACSM6Q6P461 480 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 CLEC19AQ6UXS0 136 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 ACOT7LQ6ZUV0 252 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 TCTE3Q8IZS6 198 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 OR10P1Q8NGE3 313 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 RAX2Q96IS3 184 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 GGACTQ9BVM4 153 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 SLC25A31Q9H0C2 315 aa9.74□□□□□ -0.85
CHMP2A-201ENST00000312547 IGHV4OR15-8A0A075B7B6 117 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 A0A087WW49 117 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 ANKRD34BA5PLL1 514 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 FNDC10F2Z333 226 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 SMLR1H3BR10 107 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 CCL24O00175 119 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 CLN5O75503 358 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 CST7O76096 145 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 CTSGP08311 255 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 GPR183P32249 361 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 ADMP35318 185 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 NPBWR1P48145 328 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 RND2P52198 227 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 BAXQ07812 192 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 STX12Q86Y82 276 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 OR11H1Q8NG94 326 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 OR1N2Q8NGR9 330 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 DCUN1D4Q92564 292 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 NPIPB3Q92617 1050 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 BSCL2Q96G97 398 aaPredicted RBP9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 ZNF414Q96IQ9 312 aa9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 GAR1Q9NY12 217 aaKnown RBP9.73□□□□□ -0.85
CHMP2A-201ENST00000312547 OR2T8A6NH00 312 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 PPP5D1E7EU14 171 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 LINC01619G3V211 115 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 TGOLN2O43493 480 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 IGLC1P0CG04 106 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 RPL12P30050 165 aaKnown RBP9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 S100A11P31949 105 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 ARL3P36405 182 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 MYCNOSP40205 109 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 NHLH2Q02577 135 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 SLC38A11Q08AI6 406 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 ZNF616Q08AN1 781 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 Q56UQ5 140 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 SPSB3Q6PJ21 355 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 AKAP14Q86UN6 197 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 OR4F17Q8NGA8 305 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 OR11H4Q8NGC9 324 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 ACY3Q96HD9 319 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 SLC35E1Q96K37 410 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 AQP10Q96PS8 301 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 OR4F4Q96R69 305 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 CHRDL1Q9BU40 450 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 TNFSF18Q9UNG2 199 aa9.72□□□□□ -0.85
CHMP2A-201ENST00000312547 IGKV1D-37A0A075B6S9 117 aa9.71□□□□□ -0.86
CHMP2A-201ENST00000312547 FXYD6-FXYD2A0A087WZ82 144 aa9.71□□□□□ -0.86
CHMP2A-201ENST00000312547 GNG7O60262 68 aa9.71□□□□□ -0.86
CHMP2A-201ENST00000312547 GGCTO75223 188 aaKnown RBP9.71□□□□□ -0.86
CHMP2A-201ENST00000312547 IGKV1-17P01599 117 aa9.71□□□□□ -0.86
CHMP2A-201ENST00000312547 HOXD3P31249 432 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms