RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 MT-ND6P03923 174 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 OR10J4P0C629 311 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 HSPE1P61604 102 aaKnown RBP13.83□□□□□ -0.2
FOXA1-201ENST00000250448 CR1LQ2VPA4 569 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 C1orf229Q6ZS94 237 aaPredicted RBP13.83□□□□□ -0.2
FOXA1-201ENST00000250448 PPP1R35Q8TAP8 253 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 ZNF586Q9NXT0 402 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 NAT8BQ9UHF3 227 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 HELTA6NFD8 242 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 SRRM5B3KS81 715 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 LINC00869P0C866 280 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 GNLYP22749 145 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 BRS3P32247 399 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 PSG5Q15238 335 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 OR4A47Q6IF82 309 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 NUP37Q8NFH4 326 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 FAM103A1Q9BTL3 118 aaKnown RBP13.83□□□□□ -0.2
FOXA1-201ENST00000250448 TMEM167BQ9NRX6 74 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 TMEM14BQ9NUH8 114 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 FLNCQ14315 2725 aa13.83□□□□□ -0.2
FOXA1-201ENST00000250448 CRYBB3P26998 211 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 RPL19P84098 196 aaKnown RBP13.82□□□□□ -0.2
FOXA1-201ENST00000250448 TNFAIP6P98066 277 aaPredicted RBP13.82□□□□□ -0.2
FOXA1-201ENST00000250448 SLC45A2Q9UMX9 530 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 TMEM8BA6NDV4 472 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 SHISA9B4DS77 424 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 SIAH2O43255 324 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 GPX1P07203 203 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 KRTDAPP60985 99 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 CX3CL1P78423 397 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 MZT1Q08AG7 82 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 GAGE1Q13065 139 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 PQLC2Q6ZP29 291 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 GCSAMQ8N6F7 178 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 OR4B1Q8NGF8 309 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 CORO2AQ92828 525 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 RNASE6Q93091 150 aaKnown RBP13.82□□□□□ -0.2
FOXA1-201ENST00000250448 GAL3ST2Q9H3Q3 398 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 LPAR2Q9HBW0 351 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 CALYQ9NYX4 217 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 IL19Q9UHD0 177 aa13.82□□□□□ -0.2
FOXA1-201ENST00000250448 E7EQL1 145 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 UTF1Q5T230 341 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 Q8N976 141 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 IDI2-AS1Q9NZ38 188 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 TBL2Q9Y4P3 447 aaKnown RBP13.81□□□□□ -0.2
FOXA1-201ENST00000250448 CBY3A6NI87 242 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 FNDC10F2Z333 226 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 SPINK4O60575 86 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 BATFQ16520 125 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 TMEM136Q6ZRR5 245 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 DEFB108BQ8NET1 73 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 NUDT10Q8NFP7 164 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 LEAP2Q969E1 77 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 NABP2Q9BQ15 211 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 HINT2Q9BX68 163 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 RNASE7Q9H1E1 156 aaKnown RBP13.81□□□□□ -0.2
FOXA1-201ENST00000250448 OSTCQ9NRP0 149 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 SAA2-SAA4A0A096LPE2 208 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 C22orf46C9J442 243 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 TCF21O43680 179 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 MYOD1P15172 320 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 RAB7AP51149 207 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 RNF151Q2KHN1 245 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 OR10J3Q5JRS4 329 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 KCNS1Q96KK3 526 aa13.81□□□□□ -0.2
FOXA1-201ENST00000250448 DSCAMO60469 2012 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 DIRC3C9JPN6 131 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 CDKN1BP46527 198 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 FXYD3Q14802 87 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 TIGITQ495A1 244 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 COX19Q49B96 90 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 RNF2Q99496 336 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 GCM1Q9NP62 436 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 DYSFO75923 2080 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 ARFGEF3Q5TH69 2177 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 SAA2P0DJI9 122 aaPredicted RBP13.8□□□□□ -0.2
FOXA1-201ENST00000250448 AMTP48728 403 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 ZNRF1Q8ND25 227 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 NGBQ9NPG2 151 aa13.8□□□□□ -0.2
FOXA1-201ENST00000250448 TECRQ9NZ01 308 aaKnown RBP13.8□□□□□ -0.2
FOXA1-201ENST00000250448 TCL1AP56279 114 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 KIAA1644Q3SXP7 199 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 ZNF503Q96F45 646 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 NRN1Q9NPD7 142 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 CT45A1Q5HYN5 189 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 CT45A3Q8NHU0 189 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 RCHY1Q96PM5 261 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 OR51B2Q9Y5P1 312 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 AKAP6Q13023 2319 aa13.79□□□□□ -0.2
FOXA1-201ENST00000250448 AMY1AP04745 511 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 OR5G3P0C626 314 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 PMCHP20382 165 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 SLC35B1P78383 322 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 DUX4L9Q6RFH8 374 aaPredicted RBP13.78□□□□□ -0.2
FOXA1-201ENST00000250448 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.78□□□□□ -0.2
FOXA1-201ENST00000250448 GGTLC3B5MD39 225 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 OR7C2O60412 319 aa13.78□□□□□ -0.2
FOXA1-201ENST00000250448 CD3EP07766 207 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms