RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 OR10J1P30954 320 aa12.78□□□□□ -0.36
LRFN1-201ENST00000248668 RPL8P62917 257 aaKnown RBP12.78□□□□□ -0.36
LRFN1-201ENST00000248668 STAG3L2P0CL84 134 aa12.77□□□□□ -0.36
LRFN1-201ENST00000248668 STAG3L3P0CL85 134 aa12.77□□□□□ -0.36
LRFN1-201ENST00000248668 GALR1P47211 349 aa12.77□□□□□ -0.36
LRFN1-201ENST00000248668 RAB31Q13636 194 aa12.77□□□□□ -0.36
LRFN1-201ENST00000248668 POU2AF1Q16633 256 aa12.77□□□□□ -0.36
LRFN1-201ENST00000248668 C19orf35Q6ZS72 473 aa12.77□□□□□ -0.36
LRFN1-201ENST00000248668 MUC15Q8N387 334 aa12.77□□□□□ -0.36
LRFN1-201ENST00000248668 C1QTNF9P0C862 333 aa12.77□□□□□ -0.37
LRFN1-201ENST00000248668 COX7A1P24310 79 aa12.77□□□□□ -0.37
LRFN1-201ENST00000248668 RNASEH2CQ8TDP1 164 aaKnown RBP12.77□□□□□ -0.37
LRFN1-201ENST00000248668 NABP2Q9BQ15 211 aa12.77□□□□□ -0.37
LRFN1-201ENST00000248668 POLR3KQ9Y2Y1 108 aaPredicted RBP12.77□□□□□ -0.37
LRFN1-201ENST00000248668 FAM3BP58499 235 aaPredicted RBP12.77□□□□□ -0.37
LRFN1-201ENST00000248668 PCGF1Q9BSM1 259 aa12.77□□□□□ -0.37
LRFN1-201ENST00000248668 RNASE2P10153 161 aaKnown RBP12.76□□□□□ -0.37
LRFN1-201ENST00000248668 RND2P52198 227 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 SSBP2P81877 361 aaPredicted RBP12.76□□□□□ -0.37
LRFN1-201ENST00000248668 OR5AN1Q8NGI8 311 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 BET1LQ9NYM9 111 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 CXorf1O96002 111 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 GCGP01275 180 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 OR10J4P0C629 311 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 LINC00614P0C842 121 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 IGHV1-8P0DP01 117 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 GCHFRP30047 84 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 TDRG1Q3Y452 100 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 OR5B12Q96R08 314 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 FUT9Q9Y231 359 aa12.76□□□□□ -0.37
LRFN1-201ENST00000248668 IGHV3-21A0A0B4J1V1 117 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 TNFRSF13BO14836 293 aaPredicted RBP12.75□□□□□ -0.37
LRFN1-201ENST00000248668 CNTFRP26992 372 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 LGALS4P56470 323 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 OSR1Q8TAX0 266 aaPredicted RBP12.75□□□□□ -0.37
LRFN1-201ENST00000248668 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
LRFN1-201ENST00000248668 TRBV20OR9-2A0A075B6H5 130 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 RHOBP62745 196 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM155Q4W5P6 130 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 OR4C13Q8NGP0 309 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 B9A039 149 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 LHFPL4Q7Z7J7 247 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 RAB1CQ92928 201 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
LRFN1-201ENST00000248668 OR7C2O60412 319 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 LINC00869P0C866 280 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 NHLH1Q02575 133 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 WT1-ASQ06250 92 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 PSG5Q15238 335 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 HCP5Q6MZN7 132 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 OR1L8Q8NGR8 309 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 TBX15Q96SF7 602 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 CA7P43166 264 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 LINC01551Q86U37 167 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 OR5B3Q8NH48 314 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 CTDSP1Q9GZU7 261 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 FKBP11Q9NYL4 201 aa12.74□□□□□ -0.37
LRFN1-201ENST00000248668 PFN1P07737 140 aaKnown RBP12.73□□□□□ -0.37
LRFN1-201ENST00000248668 DLX6P56179 175 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 RBX1P62877 108 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 NDUFA4L2Q9NRX3 87 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 PDE6DO43924 150 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 PRR20EP86478 221 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 PRR20CP86479 221 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 PRR20DP86480 221 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 PRR20BP86481 221 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 PRR20AP86496 221 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 KCNIP2Q9NS61 270 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 SLC45A2Q9UMX9 530 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 WASHC3Q9Y3C0 194 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 ERHP84090 104 aaKnown RBP12.73□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM144Q7Z5S9 345 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM186Q96B77 213 aa12.73□□□□□ -0.37
LRFN1-201ENST00000248668 ZNF320A2RRD8 509 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 CGB1A6NKQ9 187 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 M0QZ24 198 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM177Q53S58 311 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 LEMD1Q68G75 181 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 ST6GALNAC6Q969X2 333 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM18Q96B42 140 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 TMEM133Q9H2Q1 129 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 TRAV5A0A0B4J249 113 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 MORN5Q5VZ52 161 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 TRBV24-1A0A075B6N3 115 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 A0A1W2PRD5 423 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 A0A1W2PRF3 423 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 A0A1W2PRM7 423 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 C2orf83Q53S99 150 aa12.72□□□□□ -0.37
LRFN1-201ENST00000248668 FNDC4Q9H6D8 234 aaPredicted RBP12.72□□□□□ -0.37
LRFN1-201ENST00000248668 IGLV2-23P01705 113 aa12.71□□□□□ -0.37
LRFN1-201ENST00000248668 USF1P22415 310 aaPredicted RBP12.71□□□□□ -0.37
LRFN1-201ENST00000248668 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.37
LRFN1-201ENST00000248668 CD69Q07108 199 aa12.71□□□□□ -0.37
LRFN1-201ENST00000248668 C1orf194Q5T5A4 169 aa12.71□□□□□ -0.37
LRFN1-201ENST00000248668 NPIPB3Q92617 1050 aa12.71□□□□□ -0.37
LRFN1-201ENST00000248668 UHRF2Q96PU4 802 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms