RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 WDR82Q6UXN9 313 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM136Q6ZRR5 245 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 Q6ZSR3 168 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 C3orf62Q6ZUJ4 267 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM122BQ7Z309 247 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2W3Q7Z3T1 314 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ADM2Q7Z4H4 148 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAPPC6BQ86SZ2 158 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 FUNDC1Q8IVP5 155 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 VKORC1L1Q8N0U8 176 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ORMDL3Q8N138 153 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ZNF664Q8N3J9 261 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MMGT1Q8N4V1 131 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SPICQ8N5J4 248 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM24BQ8N5W8 94 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 DRAM1Q8N682 238 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 C11orf72Q8NBR9 251 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR4S1Q8NGB4 309 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR8B12Q8NGG6 310 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR4P4Q8NGL7 312 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR9G4Q8NGQ1 327 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR6K6Q8NGW6 343 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5J2Q8NH18 312 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR4K13Q8NH42 304 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CT45A3Q8NHU0 189 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NDNFQ8TB73 568 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 C10orf82Q8WW14 230 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM234Q8WY98 164 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MAFIPQ8WZ33 124 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR5P2Q8WZ92 322 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RAB1CQ92928 201 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TNFRSF14Q92956 283 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ISOC1Q96CN7 298 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CCDC124Q96CT7 223 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RCN3Q96D15 328 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CMBLQ96DG6 245 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SLAMF6Q96DU3 332 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 YIPF6Q96EC8 236 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SGTBQ96EQ0 304 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR52E6Q96RD3 313 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NMNAT3Q96T66 252 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 STACQ99469 402 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPL57Q9BQC6 102 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 COPS4Q9BT78 406 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TMED9Q9BVK6 235 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MRPL20Q9BYC9 149 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 LINC00470Q9BZP3 86 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 FAM107BQ9H098 131 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TOLLIPQ9H0E2 274 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 NSRP1Q9H0G5 558 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 DUSP21Q9H596 190 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TPT1P8Q9HAU6 139 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 TMEM165Q9HC07 324 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RPRD1BQ9NQG5 326 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2S2Q9NQN1 319 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SDHAF3Q9NRP4 125 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 UBQLN4Q9NRR5 601 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 INIPQ9NRY2 104 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RBFOX1Q9NWB1 397 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 MS4A12Q9NXJ0 267 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 GLTPQ9NZD2 209 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RPUSD1Q9UJJ7 312 aaKnown RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 RAB22AQ9UL26 194 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC22A13Q9Y226 551 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 CFL2Q9Y281 166 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SIGLEC7Q9Y286 467 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SLC35A3Q9Y2D2 325 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 HDGFL3Q9Y3E1 203 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 SAR1BQ9Y6B6 198 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 ENPP4Q9Y6X5 453 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 FAT1Q14517 4588 aa0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 DMBT1Q9UGM3 2413 aaPredicted RBP0.52□□□□□ -2.33
SMARCB1-209ENST00000635578 A0A075B6Q4 140 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 A0A087WUU8 490 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 LOC102724200A0A096LPH7 203 aaPredicted RBP0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IGHV2-26A0A0B4J1V2 119 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IGHV3OR16-9A0A0B4J2B5 98 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IGKV1-12A0A0C4DH73 117 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 LOC107986453A0A1B0GWG9 222 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TRAPPC13A5PLN9 417 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR6C6A6NF89 314 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RFPL4AA6NLU0 287 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 OR2AT4A6NND4 320 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CD300LBA8K4G0 201 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 IQCF6A8MYZ5 107 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 EFCAB9A8MZ26 197 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RFPL4AL1F8VTS6 287 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 H3BQF6 201 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 CLDN34H7C241 214 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 J3QLI3 93 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 J3QRK9 145 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 K7EMT4 169 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 BHLHE40O14503 412 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 RFXANKO14593 260 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 GPR171O14626 319 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 TAAR5O14804 337 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MRASO14807 208 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 FFAR1O14842 300 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 MYL12BO14950 172 aa0.51□□□□□ -2.33
SMARCB1-209ENST00000635578 POLR3GO15318 223 aaPredicted RBP0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms