RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TCF19Q9Y242 345 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 OR51B2Q9Y5P1 312 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 RAI1Q7Z5J4 1906 aaPredicted RBP10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 A0A0U1RQK1 487 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 C7orf77A4D0Y5 90 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 MAS1LP35410 378 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 P2RX4Q99571 388 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 IGHV1-3A0A0C4DH29 117 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 S100A2P29034 98 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 SSX7Q7RTT5 188 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 KIR3DL3Q8N743 410 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 SLC24A4Q8NFF2 622 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 CDC42EP3Q9UKI2 254 aa10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 TBL2Q9Y4P3 447 aaKnown RBP10.08□□□□□ -0.8
SYNGAP1-207ENST00000628646 RPL30P62888 115 aaKnown RBP10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 ADIRFQ15847 76 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 ZNF726P1Q15940 193 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 SLC35E3Q7Z769 313 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 OR52E5Q8NH55 327 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 OSR1Q8TAX0 266 aaPredicted RBP10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 ICAM4Q14773 271 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 RNF2Q99496 336 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 TCEAL7Q9BRU2 100 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 F6UZH7 168 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 RAMP3O60896 148 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 KBTBD11O94819 623 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 BCL2P10415 239 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 S100A7P31151 101 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 LGALS7P47929 136 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 DLK1P80370 383 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 C1orf122Q6ZSJ8 110 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 TBX15Q96SF7 602 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 SMR3AQ99954 134 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 TXNDC17Q9BRA2 123 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 SLC25A22Q9H936 323 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 GNB4Q9HAV0 340 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 TEPPQ6URK8 271 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 SSMEM1Q8WWF3 244 aa10.07□□□□□ -0.8
SYNGAP1-207ENST00000628646 H7BYZ3 331 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 RBP4P02753 201 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 HOXB4P17483 251 aaPredicted RBP10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 PAX5Q02548 391 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 PDPNQ86YL7 162 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 VSIRQ9H7M9 311 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 RPRMQ9NS64 109 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 GAB2Q9UQC2 676 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 CENPVL3A0A0U1RRI6 287 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 SRP19P09132 144 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 RPL27AP46776 148 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 TMEM241Q24JQ0 296 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 MMD2Q8IY49 270 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 BEND2Q8NDZ0 799 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 IFI27L2Q9H2X8 130 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 SLC45A2Q9UMX9 530 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 YIF1AO95070 293 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 BPIFB3P59826 476 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 RPL8P62917 257 aaKnown RBP10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 ZNF506Q5JVG8 444 aa10.06□□□□□ -0.8
SYNGAP1-207ENST00000628646 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 PMS2P5A8MQ11 134 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 ZNF134P52741 427 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 DEFB112Q30KQ8 113 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 UNQ5815/PRO19632Q6UWF5 114 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 OR5T1Q8NG75 326 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 OR2T6Q8NHC8 308 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 RPUSD4Q96CM3 377 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 QTRT1Q9BXR0 403 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 TEP1Q99973 2627 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 DSCAML1Q8TD84 2053 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 CENPVQ7Z7K6 275 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 OR5B3Q8NH48 314 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 ISOC2Q96AB3 205 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 AGMATQ9BSE5 352 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 MDFIC2A0A1B0GVS7 189 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 OOSP1A8MZH6 123 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 CLDN34H7C241 214 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 PROP1O75360 226 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 PF4V1P10720 104 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 FGF8P55075 233 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 DIAPH2-AS1Q14236 149 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 RNF212Q495C1 297 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 MISP3Q96FF7 219 aa10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 PARD6GQ9BYG4 376 aaPredicted RBP10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 FN1P02751 2386 aaKnown RBP10.05□□□□□ -0.8
SYNGAP1-207ENST00000628646 H3BQ15 152 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 FSTL3O95633 263 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 LY6G6DO95868 133 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 FXYD3Q14802 87 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 Q8N7P7 452 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 SIGLECL1Q8N7X8 197 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 SH2D7A6NKC9 451 aaPredicted RBP10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 INAFM1C9JVW0 142 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 NBR2O15453 112 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 LOXL3P58215 753 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 RELNP78509 3460 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 ZFP82Q8N141 532 aa10.04□□□□□ -0.8
SYNGAP1-207ENST00000628646 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms