RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 TXNDC17Q9BRA2 123 aa18.34■□□□□ 0.53
SRRM1-222ENST00000596378 MIOXQ9UGB7 285 aa18.34■□□□□ 0.53
SRRM1-222ENST00000596378 ABCA4P78363 2273 aa18.33■□□□□ 0.53
SRRM1-222ENST00000596378 DLL1O00548 723 aa18.33■□□□□ 0.53
SRRM1-222ENST00000596378 ENSAO43768 121 aaKnown RBP18.33■□□□□ 0.53
SRRM1-222ENST00000596378 GGCTO75223 188 aaKnown RBP18.33■□□□□ 0.53
SRRM1-222ENST00000596378 S100A12P80511 92 aa18.33■□□□□ 0.53
SRRM1-222ENST00000596378 OCC1Q8TAD7 63 aa18.33■□□□□ 0.53
SRRM1-222ENST00000596378 ZNF503Q96F45 646 aa18.33■□□□□ 0.53
SRRM1-222ENST00000596378 MSRB2Q9Y3D2 182 aa18.33■□□□□ 0.53
SRRM1-222ENST00000596378 MALRD1Q5VYJ5 2156 aa18.33■□□□□ 0.52
SRRM1-222ENST00000596378 REG1AP05451 166 aa18.33■□□□□ 0.52
SRRM1-222ENST00000596378 SRP14P37108 136 aaKnown RBP18.33■□□□□ 0.52
SRRM1-222ENST00000596378 PRSS8Q16651 343 aa18.33■□□□□ 0.52
SRRM1-222ENST00000596378 C8orf31Q8N9H6 132 aa18.33■□□□□ 0.52
SRRM1-222ENST00000596378 SFRP2Q96HF1 295 aa18.33■□□□□ 0.52
SRRM1-222ENST00000596378 TMEM133Q9H2Q1 129 aa18.33■□□□□ 0.52
SRRM1-222ENST00000596378 A0A087X0M5 115 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 A0A1B0GX30 115 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 FABP4P15090 132 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 FAM71F2Q6NXP2 309 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 ELOA3CA0A087WX78 387 aaPredicted RBP18.32■□□□□ 0.52
SRRM1-222ENST00000596378 OR10J4P0C629 311 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 MUC15Q8N387 334 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 TMEM37Q8WXS4 190 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 SLC35E1Q96K37 410 aa18.32■□□□□ 0.52
SRRM1-222ENST00000596378 FNDC4Q9H6D8 234 aaPredicted RBP18.32■□□□□ 0.52
SRRM1-222ENST00000596378 A0A0U1RQK1 487 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 OR7C2O60412 319 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 MT-CO2P00403 227 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 ZNF137PP52743 207 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 MORN5Q5VZ52 161 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 VSTM2AQ8TAG5 236 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 LINC00587B1AMM8 73 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 CCL21O00585 134 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 IL3RAP26951 378 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 CA7P43166 264 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 ATP5IP56385 69 aaPredicted RBP18.31■□□□□ 0.52
SRRM1-222ENST00000596378 MRGPRG-AS1Q2M3A8 158 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 KCNIP4Q6PIL6 250 aa18.31■□□□□ 0.52
SRRM1-222ENST00000596378 MDFIC2A0A1B0GVS7 189 aa18.3■□□□□ 0.52
SRRM1-222ENST00000596378 K7EN84 100 aa18.3■□□□□ 0.52
SRRM1-222ENST00000596378 CD99P14209 185 aa18.3■□□□□ 0.52
SRRM1-222ENST00000596378 CNTFRP26992 372 aa18.3■□□□□ 0.52
SRRM1-222ENST00000596378 CASP6P55212 293 aa18.3■□□□□ 0.52
SRRM1-222ENST00000596378 APELAP0DMC3 54 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 PPOXP50336 477 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 OR4A5Q8NH83 315 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 OR51M1Q9H341 326 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 TECRQ9NZ01 308 aaKnown RBP18.29■□□□□ 0.52
SRRM1-222ENST00000596378 MRPL36Q9P0J6 103 aaKnown RBP18.29■□□□□ 0.52
SRRM1-222ENST00000596378 RALYQ9UKM9 306 aaKnown RBP18.29■□□□□ 0.52
SRRM1-222ENST00000596378 TRAV5A0A0B4J249 113 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 A0A1W2PN81 502 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 A0A1W2PPI3 338 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 HLA-DRB5Q30154 266 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 C19orf35Q6ZS72 473 aa18.29■□□□□ 0.52
SRRM1-222ENST00000596378 HRNRQ86YZ3 2850 aaPredicted RBP18.29■□□□□ 0.52
SRRM1-222ENST00000596378 IGHV2-26A0A0B4J1V2 119 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 LY6HO94772 140 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 OR5G3P0C626 314 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 ACTL10Q5JWF8 245 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 ZNF841Q6ZN19 808 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 SGMS2Q8NHU3 365 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 PITPNC1Q9UKF7 332 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 VMA21Q3ZAQ7 101 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 TEX38Q6PEX7 206 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 NPIPB3Q92617 1050 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 C11orf52Q96A22 123 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 UHRF2Q96PU4 802 aa18.28■□□□□ 0.52
SRRM1-222ENST00000596378 ZNF320A2RRD8 509 aa18.27■□□□□ 0.52
SRRM1-222ENST00000596378 CRYBB3P26998 211 aa18.27■□□□□ 0.52
SRRM1-222ENST00000596378 ZNF90Q03938 601 aa18.27■□□□□ 0.52
SRRM1-222ENST00000596378 RUSC1-AS1Q66K80 236 aa18.27■□□□□ 0.52
SRRM1-222ENST00000596378 CACNG8Q8WXS5 425 aa18.27■□□□□ 0.52
SRRM1-222ENST00000596378 TRBV23-1A0A0A0MS06 115 aa18.27■□□□□ 0.51
SRRM1-222ENST00000596378 INS-IGF2F8WCM5 200 aa18.27■□□□□ 0.51
SRRM1-222ENST00000596378 TYMSP04818 313 aa18.27■□□□□ 0.51
SRRM1-222ENST00000596378 RD3LP0DJH9 198 aa18.27■□□□□ 0.51
SRRM1-222ENST00000596378 GPX4P36969 197 aaPredicted RBP18.27■□□□□ 0.51
SRRM1-222ENST00000596378 HIST1H2BLQ99880 126 aa18.27■□□□□ 0.51
SRRM1-222ENST00000596378 TMEM167BQ9NRX6 74 aa18.27■□□□□ 0.51
SRRM1-222ENST00000596378 XKRY2A2RUG3 117 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 COX7A1P24310 79 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 MC5RP33032 325 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 LGALS4P56470 323 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 SLC25A33Q9BSK2 321 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 SPTBN4Q9H254 2564 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 PSMB11A5LHX3 300 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 GGTLC3B5MD39 225 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 SLC17A3O00476 420 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 AREGP15514 252 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 HCP5Q6MZN7 132 aa18.26■□□□□ 0.51
SRRM1-222ENST00000596378 OR5I1Q13606 314 aa18.25■□□□□ 0.51
SRRM1-222ENST00000596378 ZNF672Q499Z4 452 aaPredicted RBP18.25■□□□□ 0.51
SRRM1-222ENST00000596378 TMEM183AQ8IXX5 376 aa18.25■□□□□ 0.51
SRRM1-222ENST00000596378 OR10G8Q8NGN5 311 aa18.25■□□□□ 0.51
SRRM1-222ENST00000596378 OR1P1Q8NH06 330 aa18.25■□□□□ 0.51
SRRM1-222ENST00000596378 IGLV1-47P01700 117 aa18.24■□□□□ 0.51
SRRM1-222ENST00000596378 IGHV2-70P01814 119 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms