RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	SLC25A15	Q9Y619	301 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	MUC21	A0A0G2JKD1	596 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	MUC21	A0A140T8X8	626 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	SH2D7	A6NKC9	451 aa	Predicted RBP	12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	CXorf1	O96002	111 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	STAG3L2	P0CL84	134 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	STAG3L3	P0CL85	134 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	ZNF25	P17030	456 aa	Predicted RBP	12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	PRR30	Q53SZ7	412 aa	Predicted RBP	12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	MUC21	Q5SSG8	566 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	OR4S2	Q8NH73	311 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	ANAPC16	Q96DE5	110 aa		12.1	□□□□□ -0.47
PRPF8-216	ENST00000577001	SLC25A17	O43808	307 aa		12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	CNTFR	P26992	372 aa		12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	GBGT1	Q8N5D6	347 aa		12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	TIMM9	Q9Y5J7	89 aa		12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	GATC	O43716	136 aa	Known RBP	12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	IGHV1-46	P01743	117 aa		12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	HSPE1	P61604	102 aa	Known RBP	12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	ZBTB34	Q8NCN2	500 aa		12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	TMEM242	Q9NWH2	141 aa		12.09	□□□□□ -0.47
PRPF8-216	ENST00000577001	CT45A6	P0DMU7	189 aa		12.08	□□□□□ -0.47
PRPF8-216	ENST00000577001	CT45A5	P0DMU8	189 aa		12.08	□□□□□ -0.47
PRPF8-216	ENST00000577001	CT45A7	P0DMV0	189 aa		12.08	□□□□□ -0.47
PRPF8-216	ENST00000577001	AMT	P48728	403 aa		12.08	□□□□□ -0.47
PRPF8-216	ENST00000577001	FOXA3	P55318	350 aa	Predicted RBP	12.08	□□□□□ -0.47
PRPF8-216	ENST00000577001	GGCT	O75223	188 aa	Known RBP	12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	SRI	P30626	198 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	RHOB	P62745	196 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	PPP1R35	Q8TAP8	253 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	TPPP3	Q9BW30	176 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	FAM215A	Q9Y5M1	114 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	GGTLC3	B5MD39	225 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	COX7A1	P24310	79 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	RPL15	P61313	204 aa	Known RBP	12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	UBE2L3	P68036	154 aa	Known RBP	12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	OR5AU1	Q8NGC0	362 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	OR10X1	Q8NGY0	326 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	COMMD5	Q9GZQ3	224 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	CENPE	Q02224	2701 aa		12.08	□□□□□ -0.48
PRPF8-216	ENST00000577001	PDE6D	O43924	150 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	ZNF253	O75346	499 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	C21orf62-AS1	Q17RA5	79 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	EAF1	Q96JC9	268 aa	Predicted RBP	12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	SAP30L	Q9HAJ7	183 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	GNB4	Q9HAV0	340 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	IGHV3-35	A0A0C4DH35	117 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	TEX50	A0A1B0GTY4	177 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	C15orf61	A6NNL5	157 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	KCNIP2	Q9NS61	270 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	RNF7	Q9UBF6	113 aa		12.07	□□□□□ -0.48
PRPF8-216	ENST00000577001	KBTBD11-OT1	A0A1B0GTJ5	212 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	RAB31	Q13636	194 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	PLA2G2C	Q5R387	149 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	ZADH2	Q8N4Q0	377 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	OR1B1	Q8NGR6	318 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	TECR	Q9NZ01	308 aa	Known RBP	12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	TM4SF5	O14894	197 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	LINC00869	P0C866	280 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	LINC00310	P59036	64 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	ZNF503	Q96F45	646 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	PYGO2	Q9BRQ0	406 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	TRAV8-1	A0A0A6YYK1	113 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	JPT1	Q9UK76	154 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	ZFHX3	Q15911	3703 aa		12.06	□□□□□ -0.48
PRPF8-216	ENST00000577001	TGOLN2	O43493	480 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	ZNF138	P52744	262 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	RPP30	P78346	268 aa	Known RBP	12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	PMCHL2	Q9BQD1	86 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	SELENOV	P59797	346 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	GAFA1	Q96PS6	74 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	PLSCR4	Q9NRQ2	329 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	FBXL7	Q9UJT9	491 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	CREBBP	Q92793	2442 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	CSN3	P07498	182 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	SRP14	P37108	136 aa	Known RBP	12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	RPEL1	Q2QD12	228 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	TCF24	Q7RTU0	167 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	LURAP1L	Q8IV03	231 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	OR2D3	Q8NGH3	330 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	SLC25A10	Q9UBX3	287 aa	Predicted RBP	12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001	NOTCH3	Q9UM47	2321 aa		12.05	□□□□□ -0.48
PRPF8-216	ENST00000577001		A8MXE2	369 aa		12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	YPEL1	O60688	119 aa		12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	TIGIT	Q495A1	244 aa		12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	CENPV	Q7Z7K6	275 aa	Predicted RBP	12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	YPEL2	Q96QA6	119 aa		12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	NDUFAF3	Q9BU61	184 aa		12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	MFAP2	P55001	183 aa		12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	FNDC4	Q9H6D8	234 aa	Predicted RBP	12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	TBL2	Q9Y4P3	447 aa	Known RBP	12.04	□□□□□ -0.48
PRPF8-216	ENST00000577001	RPL8	P62917	257 aa	Known RBP	12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	DMRTA1	Q5VZB9	504 aa		12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	RBMXL3	Q8N7X1	1067 aa	Known RBP	12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	FLYWCH2	Q96CP2	140 aa	Known RBP	12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	ASCL3	Q9NQ33	180 aa		12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	SIGLECL1	Q8N7X8	197 aa		12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	ZNF835	Q9Y2P0	537 aa		12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	PRSS46	E5RG02	174 aa		12.03	□□□□□ -0.48
PRPF8-216	ENST00000577001	FCN3	O75636	299 aa		12.03	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms