RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 NMBP08949 121 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 CD33P20138 364 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 UCP1P25874 307 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 FHL3Q13643 280 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 COMMD7Q86VX2 200 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 NSG2Q9Y328 171 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 IGHV3-11P01762 117 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 LGALS1P09382 135 aaKnown RBP11□□□□□ -0.65
SHMT2-217ENST00000555116 PET100P0DJ07 73 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 AREGP15514 252 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 SAMD5Q5TGI4 173 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 OR11H1Q8NG94 326 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 ARPC5LQ9BPX5 153 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 ZNF471Q9BX82 626 aaPredicted RBP11□□□□□ -0.65
SHMT2-217ENST00000555116 COMMD5Q9GZQ3 224 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 ZNF257Q9Y2Q1 563 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 TEX50A0A1B0GTY4 177 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 IGLC7A0M8Q6 106 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 NPIPB5A8MRT5 1133 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 G3V4G9 280 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 IGKV1-5P01602 117 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 PRH1P02810 166 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 CRYGCP07315 174 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 P0C879 139 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 DEFA5Q01523 94 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 FAM219AQ8IW50 185 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 LGI3Q8N145 548 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 OR1N2Q8NGR9 330 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 OR1S1Q8NH92 325 aa10.99□□□□□ -0.65
SHMT2-217ENST00000555116 TRBV9A0A0B4J1U6 114 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 S100A10P60903 97 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 C19orf35Q6ZS72 473 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 H2BFWTQ7Z2G1 175 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 C1QL4Q86Z23 238 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 OR1L8Q8NGR8 309 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 AQP10Q96PS8 301 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 SRSF8Q9BRL6 282 aaKnown RBP10.98□□□□□ -0.65
SHMT2-217ENST00000555116 QTRT1Q9BXR0 403 aaKnown RBP10.98□□□□□ -0.65
SHMT2-217ENST00000555116 TMEM222Q9H0R3 208 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 NDUFA4L2Q9NRX3 87 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 TMEM14BQ9NUH8 114 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 PRNDQ9UKY0 176 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 OR51B2Q9Y5P1 312 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 A0A0G2JLM5 398 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 C15orf61A6NNL5 157 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 IGLL1P15814 213 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 CTRB1P17538 263 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 NUP62P37198 522 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-217ENST00000555116 ZNF616Q08AN1 781 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 CTRB2Q6GPI1 263 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 LHFPL5Q8TAF8 219 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 RCC1LQ96I51 464 aaKnown RBP10.98□□□□□ -0.65
SHMT2-217ENST00000555116 MED9Q9NWA0 146 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 KLK9Q9UKQ9 250 aa10.98□□□□□ -0.65
SHMT2-217ENST00000555116 CDS2O95674 445 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 RHOGP84095 191 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 IZUMO4Q1ZYL8 232 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 PHYHIPLQ96FC7 376 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 USMG5Q96IX5 58 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 CXorf58Q96LI9 332 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 FANCD2OSQ96PS1 177 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 SLC25A32Q9H2D1 315 aa10.97□□□□□ -0.65
SHMT2-217ENST00000555116 IGHV4OR15-8A0A075B7B6 117 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 A0A087WW49 117 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 DEDDO75618 318 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 HSPB1P04792 205 aaKnown RBP10.96□□□□□ -0.65
SHMT2-217ENST00000555116 REG1AP05451 166 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 SRPXP78539 464 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 KPRPQ5T749 579 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-217ENST00000555116 ZNF343Q6P1L6 599 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 OR5B3Q8NH48 314 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 STOML3Q8TAV4 291 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 CYTL1Q9NRR1 136 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 FKBP11Q9NYL4 201 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 TMED3Q9Y3Q3 217 aa10.96□□□□□ -0.65
SHMT2-217ENST00000555116 A0A0G2JRQ6 117 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 FAM223BA6NKX1 122 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 LINC01619G3V211 115 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 ATG12O94817 140 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 OR8U8P0C7N1 319 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 AKR1C2P52895 323 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 WT1-ASQ06250 92 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 FAM223AQ8IWN6 122 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 SELENOHQ8IZQ5 122 aaKnown RBP10.95□□□□□ -0.66
SHMT2-217ENST00000555116 SLC35G3Q8N808 338 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 NECAP1Q8NC96 275 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 OR4A16Q8NH70 328 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 DPF1Q92782 380 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 TMEM56Q96MV1 263 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 TMEM56-RWDD3S4R434 201 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 OR2J3O76001 311 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 MBPP02686 304 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-217ENST00000555116 FAM74A1Q5RGS3 127 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 TMEM268Q5VZI3 342 aa10.95□□□□□ -0.66
SHMT2-217ENST00000555116 HSD17B13Q7Z5P4 300 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms