RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 AREGP15514 252 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 PSMB6P28072 239 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 CD81P60033 236 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 RBMS2Q15434 407 aaKnown RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 CD300EQ496F6 205 aaPredicted RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 TMED4Q7Z7H5 227 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 NOXA1Q86UR1 476 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 OR5B3Q8NH48 314 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 RNASE11Q8TAA1 199 aaKnown RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM230Q96A57 120 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 GALNT14Q96FL9 552 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 HINT2Q9BX68 163 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 PLEKHA3Q9HB20 300 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 ZC4H2Q9NQZ6 224 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 NDUFA4L2Q9NRX3 87 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM14BQ9NUH8 114 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 CGB1A6NKQ9 187 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 IGKV1-5P01602 117 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 PRH1P02810 166 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 DEFA4P12838 97 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 CCR6P51684 374 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 NKX2-5P52952 324 aaPredicted RBP8.92□□□□□ -0.98
CKAP4-202ENST00000552828 RHOGP84095 191 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 ATP5G2Q06055 141 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 DEFB114Q30KQ6 69 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM128Q5BJH2 165 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 FAM209BQ5JX69 171 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 FAM219AQ8IW50 185 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 SELENOHQ8IZQ5 122 aaKnown RBP8.92□□□□□ -0.98
CKAP4-202ENST00000552828 NECAP1Q8NC96 275 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 RBPMSQ93062 196 aaKnown RBP8.92□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM56Q96MV1 263 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 FAM110AQ9BQ89 295 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 DMRT1Q9Y5R6 373 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM56-RWDD3S4R434 201 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 FRAS1Q86XX4 4008 aa8.92□□□□□ -0.98
CKAP4-202ENST00000552828 PIGBOS1A0A0B4J2F0 54 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 IGLC7A0M8Q6 106 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 DBX1A6NMT0 343 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 INMT-MINDY4F8WBC2 141 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 NDUFB6O95139 128 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 C1QBP02746 253 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 REG1AP05451 166 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 CD7P09564 240 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 P0C879 139 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 OR13C7P0DN81 318 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 HIST1H1BP16401 226 aaKnown RBP8.91□□□□□ -0.98
CKAP4-202ENST00000552828 CTRB1P17538 263 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 HSPE1P61604 102 aaKnown RBP8.91□□□□□ -0.98
CKAP4-202ENST00000552828 RRAS2P62070 204 aaPredicted RBP8.91□□□□□ -0.98
CKAP4-202ENST00000552828 SUPT4H1P63272 117 aaKnown RBP8.91□□□□□ -0.98
CKAP4-202ENST00000552828 SRPXP78539 464 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 EXOSC2Q13868 293 aaKnown RBP8.91□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM187Q14656 261 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM268Q5VZI3 342 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 CTRB2Q6GPI1 263 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 DEFB125Q8N687 156 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 OR10W1Q8NGF6 305 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 LHFPL5Q8TAF8 219 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 IL22RA2Q969J5 263 aa8.91□□□□□ -0.98
CKAP4-202ENST00000552828 LSM10Q969L4 123 aaKnown RBP8.91□□□□□ -0.98
CKAP4-202ENST00000552828 TECRQ9NZ01 308 aaKnown RBP8.91□□□□□ -0.98
CKAP4-202ENST00000552828 C7orf66A4D0T2 115 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 C2orf70A6NJV1 201 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 OR11H12B2RN74 326 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 LGALS9O00182 355 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 CYB5BO43169 146 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 OR2J3O76001 311 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 FOLR2P14207 255 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 VAMP1P23763 118 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 WT1-ASQ06250 92 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 IZUMO4Q1ZYL8 232 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 LGI3Q8N145 548 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 PDCD10Q9BUL8 212 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 FBXL7Q9UJT9 491 aa8.9□□□□□ -0.98
CKAP4-202ENST00000552828 IFNA17P01571 189 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 BTCP35070 178 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 UBE2MP61081 183 aaKnown RBP8.89□□□□□ -0.99
CKAP4-202ENST00000552828 PRCDQ00LT1 54 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 KLK9Q2XQG4 91 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 C15orf32Q32M92 178 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 C19orf35Q6ZS72 473 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 GPHB5Q86YW7 130 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 FANCD2OSQ96PS1 177 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 WFDC10AQ9H1F0 79 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 SRD5A3Q9H8P0 318 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.89□□□□□ -0.99
CKAP4-202ENST00000552828 PRR13Q9NZ81 148 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 THYN1Q9P016 225 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 KLK9Q9UKQ9 250 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 KMT2AQ03164 3969 aa8.89□□□□□ -0.99
CKAP4-202ENST00000552828 IGLV11-55A0A075B6I3 123 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 A0A0B4J2A0 478 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 A0A0G2JRQ6 117 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 ST8SIA3O43173 380 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 GGCTO75223 188 aaKnown RBP8.88□□□□□ -0.99
CKAP4-202ENST00000552828 NDUFB8O95169 186 aa8.88□□□□□ -0.99
CKAP4-202ENST00000552828 SFT2D2O95562 160 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms