RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 CT45A1Q5HYN5 189 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 GCSAMLQ5JQS6 135 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 C1orf194Q5T5A4 169 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 OR4A47Q6IF82 309 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 TEX38Q6PEX7 206 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 PQLC2Q6ZP29 291 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 MRPL52Q86TS9 123 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 DEFB123Q8N688 67 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 OR5T1Q8NG75 326 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 CT45A3Q8NHU0 189 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 CACNG8Q8WXS5 425 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 OR2V2Q96R30 315 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 RNF2Q99496 336 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 PPP1R14DQ9NXH3 145 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 TECRQ9NZ01 308 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 IDI2-AS1Q9NZ38 188 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 RNF7Q9UBF6 113 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 IL19Q9UHD0 177 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 TP53TG5Q9Y2B4 290 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 OR51B2Q9Y5P1 312 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 USF3Q68DE3 2245 aa4.88□□□□□ -1.63
CHMP4A-210ENST00000552620 IGLV3-9A0A075B6K5 115 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 HELTA6NFD8 242 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 INS-IGF2F8WCM5 200 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 PRRG2O14669 202 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 CEACAM4O75871 244 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 CA2P00918 260 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 MT-ND6P03923 174 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 TFF1P04155 84 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 LINC00869P0C866 280 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 TPPP2P59282 170 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 RANP62826 216 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 PRCDQ00LT1 54 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 C2orf83Q53S99 150 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 STUMQ69YW2 141 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 WDR73Q6P4I2 378 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 PIP4P1Q86T03 277 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 ZADH2Q8N4Q0 377 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF439Q8NDP4 499 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 OR1L8Q8NGR8 309 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 OR5B3Q8NH48 314 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 OR4A5Q8NH83 315 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 CMTM2Q8TAZ6 248 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 ITLN1Q8WWA0 313 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 GNB1LQ9BYB4 327 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 MRPL32Q9BYC8 188 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 PLEKHA3Q9HB20 300 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 OSTCQ9NRP0 149 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 BET1LQ9NYM9 111 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 YTHDF2Q9Y5A9 579 aaKnown RBP4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 PRUNE2Q8WUY3 3088 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 PTPRBP23467 1997 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 DOCK11Q5JSL3 2073 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 TECTAO75443 2155 aa4.87□□□□□ -1.63
CHMP4A-210ENST00000552620 AHCTF1Q8WYP5 2266 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 TRBV20OR9-2A0A075B6H5 130 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 IGHV3OR15-7A0A075B7D8 119 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SAA2-SAA4A0A096LPE2 208 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 A0A1W2PRE2 83 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 hADV38S2A0JD32 116 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 NPIPB5A8MRT5 1133 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 J3QR06 171 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 M0QZK8 103 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 M0R1B8 84 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SPRY3O43610 288 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SCGB1D1O95968 90 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SAA2P0DJI9 122 aaPredicted RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SFTPCP11686 197 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 IRF2P14316 349 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 CRISP2P16562 243 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 PLA2G5P39877 138 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF83P51522 516 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 RPL31P62899 125 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 ERHP84090 104 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 MEF2CQ06413 473 aaPredicted RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 RPEL1Q2QD12 228 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 TIGITQ495A1 244 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 TEX36Q5VZQ5 186 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF788Q6ZQV5 615 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SLC25A48Q6ZT89 311 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 LRP11Q86VZ4 500 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 VKORC1L1Q8N0U8 176 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 LYG1Q8N1E2 194 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNF114Q8NC26 417 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 ZNRF1Q8ND25 227 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 OR4P4Q8NGL7 312 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 OSR1Q8TAX0 266 aaPredicted RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SSMEM1Q8WWF3 244 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 MS4A10Q96PG2 267 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 DERL1Q9BUN8 251 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 SLC35D1Q9NTN3 355 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 TMEM106BQ9NUM4 274 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 BEX4Q9NWD9 120 aaPredicted RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 NAGKQ9UJ70 344 aa4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 RPUSD1Q9UJJ7 312 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-210ENST00000552620 HCFC1P51610 2035 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 GTF3C1Q12789 2109 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 KIR2DL5BA0A0G2JN68 375 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 KIR2DL5BA0A0G2JPC4 375 aa4.85□□□□□ -1.63
CHMP4A-210ENST00000552620 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms