RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 IGHV1-69-2A0A0G2JMI3 117 aa13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 ZNF705GA8MUZ8 300 aaPredicted RBP13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 RPL8P62917 257 aaKnown RBP13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 MLANAQ16655 118 aa13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 C11orf42Q8N5U0 333 aa13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 OR4C13Q8NGP0 309 aa13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 ATG101Q9BSB4 218 aa13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 TMEM204Q9BSN7 226 aa13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 SRD5A3Q9H8P0 318 aa13.05□□□□□ -0.32
SCNN1A-221ENST00000543768 B9A039 149 aa13.04□□□□□ -0.32
SCNN1A-221ENST00000543768 RAB4AP20338 218 aa13.04□□□□□ -0.32
SCNN1A-221ENST00000543768 COA6Q5JTJ3 125 aaKnown RBP13.04□□□□□ -0.32
SCNN1A-221ENST00000543768 ZNF114Q8NC26 417 aa13.04□□□□□ -0.32
SCNN1A-221ENST00000543768 OR5T1Q8NG75 326 aa13.04□□□□□ -0.32
SCNN1A-221ENST00000543768 OR5B12Q96R08 314 aa13.04□□□□□ -0.32
SCNN1A-221ENST00000543768 TRBV20OR9-2A0A075B6H5 130 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 CD3EP07766 207 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 G0S2P27469 103 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 ZNF137PP52743 207 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 PDPNQ86YL7 162 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 LINC01560Q8TB33 94 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 COMMD5Q9GZQ3 224 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 AURKAIP1Q9NWT8 199 aaPredicted RBP13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 MSRB2Q9Y3D2 182 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 SCO2A0A1W2PP80 73 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 IGLV2-23P01705 113 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 USF1P22415 310 aaPredicted RBP13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 CYB5R2Q6BCY4 276 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 OR4P4Q8NGL7 312 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 TMEM167AQ8TBQ9 72 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 SNHG12Q9BXW3 62 aa13.03□□□□□ -0.32
SCNN1A-221ENST00000543768 PGPEP1LA6NFU8 196 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 CGB1A6NKQ9 187 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 INS-IGF2F8WCM5 200 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 IGHV1-8P0DP01 117 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 CD69Q07108 199 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 CLEC12BQ2HXU8 276 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 FAM78BQ5VT40 261 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 MIR17HGQ75NE6 70 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 OR9G1Q8NH87 305 aa13.02□□□□□ -0.32
SCNN1A-221ENST00000543768 GATA2P23769 480 aaPredicted RBP13.02□□□□□ -0.33
SCNN1A-221ENST00000543768 CHRNA7P36544 502 aa13.02□□□□□ -0.33
SCNN1A-221ENST00000543768 PCGF1Q9BSM1 259 aa13.02□□□□□ -0.33
SCNN1A-221ENST00000543768 GGCTO75223 188 aaKnown RBP13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 ACTL6BO94805 426 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 OR10J1P30954 320 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 OR4A5Q8NH83 315 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 WASHC3Q9Y3C0 194 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 A0A1W2PPQ1 181 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 C1QTNF9P0C862 333 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 CD99P14209 185 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 GRNP28799 593 aaKnown RBP13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 SRP14P37108 136 aaKnown RBP13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 ERHP84090 104 aaKnown RBP13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 VSTM2AQ8TAG5 236 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 FUT9Q9Y231 359 aa13.01□□□□□ -0.33
SCNN1A-221ENST00000543768 LYNX1G3V0Z9 82 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 M0R143 59 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 SIAH2O43255 324 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 LYNX1P0DP58 116 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 CA7P43166 264 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 WT1-ASQ06250 92 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 C10orf55Q5SWW7 151 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 OR2T10Q8NGZ9 312 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 CACNG8Q8WXS5 425 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 RITA1Q96K30 269 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 SLC35E1Q96K37 410 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 ZNF430Q9H8G1 570 aaPredicted RBP13□□□□□ -0.33
SCNN1A-221ENST00000543768 PPP5D1E7EU14 171 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 DLL1O00548 723 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 MT-CO2P00403 227 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 FBXL19-AS1Q494R0 122 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 ZNF503Q96F45 646 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 ACY3Q96HD9 319 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 TMEM133Q9H2Q1 129 aa13□□□□□ -0.33
SCNN1A-221ENST00000543768 A0A1W2PN81 502 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 FAM90A27PA6NNH2 459 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 PDLIM4P50479 330 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 MRGPRG-AS1Q2M3A8 158 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 ZNF25P17030 456 aaPredicted RBP12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 ZNF841Q6ZN19 808 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 PNKDQ8N490 385 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 OR2T6Q8NHC8 308 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 OCC1Q8TAD7 63 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 C11orf52Q96A22 123 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 CBY1Q9Y3M2 126 aa12.99□□□□□ -0.33
SCNN1A-221ENST00000543768 PLXNB1O43157 2135 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 TYMSP04818 313 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 OR5G3P0C626 314 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 MC5RP33032 325 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 DLX1P56177 255 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 FAM3BP58499 235 aaPredicted RBP12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 ERVFC1-1P60608 527 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 IQCJQ1A5X6 159 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 HLA-DRB5Q30154 266 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 MUC15Q8N387 334 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 SFRP2Q96HF1 295 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 TPSG1Q9NRR2 321 aa12.98□□□□□ -0.33
SCNN1A-221ENST00000543768 RALYQ9UKM9 306 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms