RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 OR1P1Q8NH06 330 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 ACY3Q96HD9 319 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 RITA1Q96K30 269 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 IMMP2LQ96T52 175 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 COMMD5Q9GZQ3 224 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 TMEM133Q9H2Q1 129 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 AURKAIP1Q9NWT8 199 aaPredicted RBP10.82□□□□□ -0.68
VPS33B-202ENST00000535906 WASHC3Q9Y3C0 194 aa10.82□□□□□ -0.68
VPS33B-202ENST00000535906 TRBV23-1A0A0A0MS06 115 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 USF1P22415 310 aaPredicted RBP10.81□□□□□ -0.68
VPS33B-202ENST00000535906 GCHFRP30047 84 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 PRR20EP86478 221 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 PRR20CP86479 221 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 PRR20DP86480 221 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 PRR20BP86481 221 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 PRR20AP86496 221 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 SPATA31B1PQ5VZV4 182 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 ZNF114Q8NC26 417 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 TMEM167AQ8TBQ9 72 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 BTF3L4Q96K17 158 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 TMEM204Q9BSN7 226 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 PRDM13Q9H4Q3 707 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 PLXNB1O43157 2135 aa10.81□□□□□ -0.68
VPS33B-202ENST00000535906 TRBV20OR9-2A0A075B6H5 130 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 CGB1A6NKQ9 187 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 LY6HO94772 140 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 C1QTNF9P0C862 333 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 LINC00869P0C866 280 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 PDLIM4P50479 330 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 FOXL1Q12952 345 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 GAMTQ14353 236 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 FAM209BQ5JX69 171 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 C10orf55Q5SWW7 151 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 FAM78BQ5VT40 261 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 TMEM144Q7Z5S9 345 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 OR1L8Q8NGR8 309 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 SFRP2Q96HF1 295 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 FUT9Q9Y231 359 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 YTHDF2Q9Y5A9 579 aaKnown RBP10.8□□□□□ -0.68
VPS33B-202ENST00000535906 IGHV3-72A0A0B4J1Y9 119 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 SCO2A0A1W2PP80 73 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 PGPEP1LA6NFU8 196 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 MT-CO2P00403 227 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 RD3LP0DJH9 198 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 ZNF430Q9H8G1 570 aaPredicted RBP10.8□□□□□ -0.68
VPS33B-202ENST00000535906 CHODLQ9H9P2 273 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 NAV3Q8IVL0 2385 aa10.8□□□□□ -0.68
VPS33B-202ENST00000535906 IGHV2-26A0A0B4J1V2 119 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 FOXH1O75593 365 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 IL3RAP26951 378 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 PPOXP50336 477 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 VSTM2AQ8TAG5 236 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 RNASEH2CQ8TDP1 164 aaKnown RBP10.79□□□□□ -0.68
VPS33B-202ENST00000535906 TPSG1Q9NRR2 321 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 SLC45A2Q9UMX9 530 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 MDFIC2A0A1B0GVS7 189 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 SLC25A17O43808 307 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 AMBPP02760 352 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 GATA2P23769 480 aaPredicted RBP10.79□□□□□ -0.68
VPS33B-202ENST00000535906 ATP5IP56385 69 aaPredicted RBP10.79□□□□□ -0.68
VPS33B-202ENST00000535906 WT1-ASQ06250 92 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 OR4A5Q8NH83 315 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 TMEM37Q8WXS4 190 aa10.79□□□□□ -0.68
VPS33B-202ENST00000535906 ENSAO43768 121 aaKnown RBP10.78□□□□□ -0.68
VPS33B-202ENST00000535906 FSTL3O95633 263 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 IGLV1-47P01700 117 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 MC5RP33032 325 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 ERHP84090 104 aaKnown RBP10.78□□□□□ -0.68
VPS33B-202ENST00000535906 CD69Q07108 199 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 MRGPRG-AS1Q2M3A8 158 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 ITPR1Q14643 2758 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 PPIAL4CA0A0B4J2A2 164 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 INS-IGF2F8WCM5 200 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 ACTL6BO94805 426 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 PPIAL4GP0DN37 164 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 RPL15P61313 204 aaKnown RBP10.78□□□□□ -0.68
VPS33B-202ENST00000535906 LY6DQ14210 128 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 HLA-DRB5Q30154 266 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 OR4P4Q8NGL7 312 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 OR5R1Q8NH85 324 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 C11orf52Q96A22 123 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 ARL2-SNX15V9GYD0 113 aa10.78□□□□□ -0.68
VPS33B-202ENST00000535906 A0A0U1RQK1 487 aa10.77□□□□□ -0.68
VPS33B-202ENST00000535906 ZNF320A2RRD8 509 aa10.77□□□□□ -0.68
VPS33B-202ENST00000535906 OR10J1P30954 320 aa10.77□□□□□ -0.68
VPS33B-202ENST00000535906 JOSD1Q15040 202 aaPredicted RBP10.77□□□□□ -0.68
VPS33B-202ENST00000535906 C9orf152Q5JTZ5 239 aa10.77□□□□□ -0.68
VPS33B-202ENST00000535906 OR2T6Q8NHC8 308 aa10.77□□□□□ -0.68
VPS33B-202ENST00000535906 SGMS2Q8NHU3 365 aa10.77□□□□□ -0.68
VPS33B-202ENST00000535906 SPTBN1Q01082 2364 aaKnown RBP10.77□□□□□ -0.69
VPS33B-202ENST00000535906 A0A1W2PN81 502 aa10.77□□□□□ -0.69
VPS33B-202ENST00000535906 DLL1O00548 723 aa10.77□□□□□ -0.69
VPS33B-202ENST00000535906 AREGP15514 252 aa10.77□□□□□ -0.69
VPS33B-202ENST00000535906 TEX38Q6PEX7 206 aa10.77□□□□□ -0.69
VPS33B-202ENST00000535906 MIR17HGQ75NE6 70 aa10.77□□□□□ -0.69
VPS33B-202ENST00000535906 TNFRSF14Q92956 283 aa10.77□□□□□ -0.69
VPS33B-202ENST00000535906 UHRF2Q96PU4 802 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms