RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 ZFAND1Q8TCF1 268 aa12.12□□□□□ -0.47
SCLT1-204ENST00000503215 MARC2Q969Z3 335 aa12.12□□□□□ -0.47
SCLT1-204ENST00000503215 ABHD1Q96SE0 405 aa12.12□□□□□ -0.47
SCLT1-204ENST00000503215 C20orf24Q9BUV8 137 aa12.12□□□□□ -0.47
SCLT1-204ENST00000503215 CTSGP08311 255 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 SPINK9Q5DT21 86 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 RBPMS2Q6ZRY4 209 aaKnown RBP12.11□□□□□ -0.47
SCLT1-204ENST00000503215 H2BFWTQ7Z2G1 175 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 CCDC28AQ8IWP9 274 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 IQCF2Q8IXL9 164 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 SLC38A6Q8IZM9 456 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 OR2C3Q8N628 320 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 OR4D10Q8NGI6 311 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 BSCL2Q96G97 398 aaPredicted RBP12.11□□□□□ -0.47
SCLT1-204ENST00000503215 SDHCQ99643 169 aaPredicted RBP12.11□□□□□ -0.47
SCLT1-204ENST00000503215 C5orf66Q9H5L9 145 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 UBQLN2Q9UHD9 624 aa12.11□□□□□ -0.47
SCLT1-204ENST00000503215 TRAV25A0A0B4J276 109 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 I3L2K1 104 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 CYB5BO43169 146 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 IGKV1-5P01602 117 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 CD3DP04234 171 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 NKX2-5P52952 324 aaPredicted RBP12.1□□□□□ -0.47
SCLT1-204ENST00000503215 Q56UQ5 140 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 LHFPL1Q86WI0 220 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 OR1L6Q8NGR2 347 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 OR1P1Q8NH06 330 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 OR4A16Q8NH70 328 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 MISP3Q96FF7 219 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 OVOL2Q9BRP0 275 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 FAM212BQ9NTI7 297 aaPredicted RBP12.1□□□□□ -0.47
SCLT1-204ENST00000503215 FKBP11Q9NYL4 201 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 TBC1D24Q9ULP9 559 aa12.1□□□□□ -0.47
SCLT1-204ENST00000503215 IGHV3-49A0A0A0MS15 119 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 NDUFA4O00483 81 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 PGAM2P15259 253 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 TNFSF8P32971 234 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 MZT2AQ6P582 158 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 SPSB3Q6PJ21 355 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 TP53RKQ96S44 253 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 LYSTQ99698 3801 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 GGTLC1Q9BX51 225 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 MIXL1Q9H2W2 232 aa12.09□□□□□ -0.47
SCLT1-204ENST00000503215 DAZ1Q9NQZ3 744 aaKnown RBP12.09□□□□□ -0.47
SCLT1-204ENST00000503215 LOC102724200A0A096LPH7 203 aaPredicted RBP12.08□□□□□ -0.48
SCLT1-204ENST00000503215 C1QBP02746 253 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 S100GP29377 79 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 PIGPP57054 158 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 HSPE1P61604 102 aaKnown RBP12.08□□□□□ -0.48
SCLT1-204ENST00000503215 PRCDQ00LT1 54 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 ANKRD55Q3KP44 614 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 SP6Q3SY56 376 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 RNASE10Q5GAN6 216 aaKnown RBP12.08□□□□□ -0.48
SCLT1-204ENST00000503215 NRARPQ7Z6K4 114 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 MTFP1Q9UDX5 166 aa12.08□□□□□ -0.48
SCLT1-204ENST00000503215 A0A0B4J293 547 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 TSPAN4O14817 238 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 MT-CO2P00403 227 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 P0C879 139 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 RND3P61587 244 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 ODF3L2Q3SX64 289 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 SPAG8Q99932 426 aaPredicted RBP12.07□□□□□ -0.48
SCLT1-204ENST00000503215 SMPXQ9UHP9 88 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 DNAH1Q9P2D7 4330 aa12.07□□□□□ -0.48
SCLT1-204ENST00000503215 LOC105371267A0A1B0GV96 52 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 K7EMT4 169 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 CTDSP2O14595 271 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 CTSDP07339 412 aaPredicted RBP12.06□□□□□ -0.48
SCLT1-204ENST00000503215 MZT2BQ6NZ67 158 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 DUSP18Q8NEJ0 188 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 AP3S1Q92572 193 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 PINX1Q96BK5 328 aaKnown RBP12.06□□□□□ -0.48
SCLT1-204ENST00000503215 ATP6V0BQ99437 205 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 RNF2Q99496 336 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 ARPC5LQ9BPX5 153 aa12.06□□□□□ -0.48
SCLT1-204ENST00000503215 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 A0A0G2JRQ6 117 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 C15orf62A8K5M9 175 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 YIF1AO95070 293 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 MFAP4P55083 255 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 EWSR1Q01844 656 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCLT1-204ENST00000503215 FAAP20Q6NZ36 180 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 SLC51BQ86UW2 128 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 ZNF114Q8NC26 417 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 OR13C8Q8NGS7 320 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 V9GYH0 126 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 C3orf85A0A1B0GTC6 90 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 CHEK1O14757 476 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 NUPL2O15504 423 aaKnown RBP12.05□□□□□ -0.48
SCLT1-204ENST00000503215 ST8SIA3O43173 380 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 CD74P04233 296 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 ZNF124Q15973 351 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 ARRDC1Q8N5I2 433 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 TMEM229BQ8NBD8 167 aa12.05□□□□□ -0.48
SCLT1-204ENST00000503215 TERB2Q8NHR7 220 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms