RNA–Protein interactions for RNA: ENST00000476862.1

ABCB1-204, Transcript of ATP binding cassette subfamily B member 1, human

TSL 3

Gene ABCB1, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCB1-204	ENST00000476862	NPBWR1	P48145	328 aa		13.49	□□□□□ -0.25
ABCB1-204	ENST00000476862	APOC4	P55056	127 aa		13.49	□□□□□ -0.25
ABCB1-204	ENST00000476862	IL18	Q14116	193 aa		13.49	□□□□□ -0.25
ABCB1-204	ENST00000476862	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.49	□□□□□ -0.25
ABCB1-204	ENST00000476862	ZNF114	Q8NC26	417 aa		13.49	□□□□□ -0.25
ABCB1-204	ENST00000476862	DUSP18	Q8NEJ0	188 aa		13.49	□□□□□ -0.25
ABCB1-204	ENST00000476862	TP53RK	Q96S44	253 aa		13.49	□□□□□ -0.25
ABCB1-204	ENST00000476862	IGHV3OR16-8	A0A075B7F1	116 aa		13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	CTSG	P08311	255 aa		13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	HOXA1	P49639	335 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	CMC4	P56277	68 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	SPINK9	Q5DT21	86 aa		13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	MARCH1	Q8TCQ1	289 aa		13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	DIRAS2	Q96HU8	199 aa		13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	GINS3	Q9BRX5	216 aa		13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	UBQLN2	Q9UHD9	624 aa		13.48	□□□□□ -0.25
ABCB1-204	ENST00000476862	TRAV14DV4	A0A0A6YYC5	116 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862		I3L2K1	104 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	CORT	O00230	105 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	CD74	P04233	296 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	CTSD	P07339	412 aa	Predicted RBP	13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	FCGR2B	P31994	310 aa	Predicted RBP	13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	ADM	P35318	185 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	ALDH3B2	P48448	385 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	PAFAH1B2	P68402	229 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	IZUMO4	Q1ZYL8	232 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	SP6	Q3SY56	376 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	TMEM116	Q8NCL8	245 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	OR13C8	Q8NGS7	320 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	RAB2B	Q8WUD1	216 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	SMPX	Q9UHP9	88 aa		13.47	□□□□□ -0.25
ABCB1-204	ENST00000476862	DNAH7	Q8WXX0	4024 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	CTDSP2	O14595	271 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	ST8SIA3	O43173	380 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	IGKV1-5	P01602	117 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	IGHV3-48	P01763	117 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	AKAIN1	P0CW23	69 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	OR4D10	Q8NGI6	311 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	RHPN1-AS1	Q9BWJ2	59 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	NXF2	Q9GZY0	626 aa	Known RBP	13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	MIXL1	Q9H2W2	232 aa		13.46	□□□□□ -0.25
ABCB1-204	ENST00000476862	IGHV7-4-1	A0A0J9YVY3	117 aa		13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862		F8W735	103 aa	Predicted RBP	13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862	ETV6	P41212	452 aa		13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862	DHODH	Q02127	395 aa		13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862	SPCS2	Q15005	226 aa		13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862	FAM219A	Q8IW50	185 aa		13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862	STPG3	Q8N7X2	389 aa		13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862	BCL7B	Q9BQE9	202 aa		13.45	□□□□□ -0.26
ABCB1-204	ENST00000476862		A0A0B4J293	547 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	UBE2C	O00762	179 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	JTB	O76095	146 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	CD5	P06127	495 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	UCP1	P25874	307 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	TMBIM6	P55061	237 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	SMIM4	Q8WVI0	70 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	SCGB3A2	Q96PL1	93 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	PRRT1	Q99946	306 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	KCNIP3	Q9Y2W7	256 aa		13.44	□□□□□ -0.26
ABCB1-204	ENST00000476862	IGKV3-7	A0A075B6H7	116 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	IGHV3-49	A0A0A0MS15	119 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	LCE6A	A0A183	80 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	CHEK1	O14757	476 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	CTDSPL	O15194	276 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	OPRK1	P41145	380 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	TFPI2	P48307	235 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	SURF2	Q15527	256 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	ZNF600	Q6ZNG1	722 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	RNF2	Q99496	336 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	TMEM231	Q9H6L2	316 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	CCDC59	Q9P031	241 aa	Known RBP	13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	RSL24D1	Q9UHA3	163 aa	Known RBP	13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	SCP2D1	Q9UJQ7	156 aa		13.43	□□□□□ -0.26
ABCB1-204	ENST00000476862	INS-IGF2	F8WCM5	200 aa		13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	OR5AC1	P0C628	307 aa		13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	RPL11	P62913	178 aa	Known RBP	13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	FAAP20	Q6NZ36	180 aa		13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	RBPMS	Q93062	196 aa	Known RBP	13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	GALNT14	Q96FL9	552 aa		13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	NARS2	Q96I59	477 aa	Known RBP	13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	OR10C1	Q96KK4	312 aa		13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	TMEM222	Q9H0R3	208 aa		13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	NAA60	Q9H7X0	242 aa		13.42	□□□□□ -0.26
ABCB1-204	ENST00000476862	KIR2DL5B	A0A0G2JN68	375 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	KIR2DL5B	A0A0G2JPC4	375 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	DNASE2	O00115	360 aa	Predicted RBP	13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	SPRY2	O43597	315 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	CDS2	O95674	445 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	RPL35A	P18077	110 aa	Known RBP	13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	SPCS3	P61009	180 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862		Q6ZWC4	215 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	KIR2DL5A	Q8N109	375 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	KIR2DL5B	Q8NHK3	375 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	TMEM230	Q96A57	120 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	OVOL2	Q9BRP0	275 aa		13.41	□□□□□ -0.26
ABCB1-204	ENST00000476862	HEYL	Q9NQ87	328 aa	Predicted RBP	13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms