RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CYYR1Q96J86 154 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 ZNF286AQ9HBT8 521 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 ONECUT1Q9UBC0 465 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 LHFPL6Q9Y693 200 aa8.31□□□□□ -1.08
NUP50-214ENST00000469163 MYO9AB2RTY4 2548 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 OR4C46A6NHA9 309 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 DEGS1O15121 323 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 ZNF488Q96MN9 340 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 RAB40CQ96S21 281 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 SPAG8Q99932 426 aaPredicted RBP8.3□□□□□ -1.08
NUP50-214ENST00000469163 OR7C1O76099 320 aaPredicted RBP8.3□□□□□ -1.08
NUP50-214ENST00000469163 EGR1P18146 543 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 MFAP4P55083 255 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 SLC22A24Q8N4F4 322 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 SNRNP40Q96DI7 357 aaKnown RBP8.3□□□□□ -1.08
NUP50-214ENST00000469163 A1L4Q6 167 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 TFF1P04155 84 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 MGST1P10620 155 aaKnown RBP8.3□□□□□ -1.08
NUP50-214ENST00000469163 PAX9P55771 341 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 RPS4XP62701 263 aaKnown RBP8.3□□□□□ -1.08
NUP50-214ENST00000469163 C9orf106Q8NAJ2 232 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 PLPPR1Q8TBJ4 325 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 ADAT3Q96EY9 351 aaPredicted RBP8.3□□□□□ -1.08
NUP50-214ENST00000469163 KCNK17Q96T54 332 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 VSIRQ9H7M9 311 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 SLC39A9Q9NUM3 307 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 ACANP16112 2415 aa8.3□□□□□ -1.08
NUP50-214ENST00000469163 IGLV1-36A0A0B4J1U3 117 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 PITX3O75364 302 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 MT-ATP8P03928 68 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 CA6P23280 308 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 YPEL3P61236 119 aaPredicted RBP8.29□□□□□ -1.08
NUP50-214ENST00000469163 PSG4Q00888 419 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 ABCA11PQ4W5N1 156 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
NUP50-214ENST00000469163 CENPVQ7Z7K6 275 aaPredicted RBP8.29□□□□□ -1.08
NUP50-214ENST00000469163 GGNQ86UU5 652 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 SCGB1C1Q8TD33 95 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 OR5P3Q8WZ94 311 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 PTH2Q96A98 100 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 KCNS2Q9ULS6 477 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 Q0VG73 95 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 EMC4Q5J8M3 183 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 OR5D13Q8NGL4 314 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 IL1F10Q8WWZ1 152 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 BORCS8Q96FH0 119 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 PROCRQ9UNN8 238 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 ZNF732B4DXR9 585 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 UBE2G1P62253 170 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 SEC11AP67812 179 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 VAX1Q5SQQ9 334 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 BPIFA4PQ86YQ2 179 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 FADS6Q8N9I5 356 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 OR51T1Q8NGJ9 327 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 GLMPQ8WWB7 406 aa8.29□□□□□ -1.08
NUP50-214ENST00000469163 H0YJW9 148 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 CCL21O00585 134 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 SRIP30626 198 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 TM4SF20Q53R12 229 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 TMEM97Q5BJF2 176 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 TMEM252Q8N6L7 170 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 C4orf45Q96LM5 186 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 OR1A1Q9P1Q5 309 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 ZNF257Q9Y2Q1 563 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 CSDC2Q9Y534 153 aaKnown RBP8.28□□□□□ -1.08
NUP50-214ENST00000469163 GAGE12JA6NER3 117 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 H3BP45 60 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 TNFRSF13BO14836 293 aaPredicted RBP8.28□□□□□ -1.08
NUP50-214ENST00000469163 TIMM8AO60220 97 aaPredicted RBP8.28□□□□□ -1.08
NUP50-214ENST00000469163 GAGE7O76087 117 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 HBZP02008 142 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 GAGE12FP0CL80 117 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 GAGE12GP0CL81 117 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 GAGE12IP0CL82 117 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 GAGE4Q13068 117 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 WFDC2Q14508 124 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 KIR3DS1Q14943 382 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 ACP7Q6ZNF0 438 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 MDP1Q86V88 176 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 LRRC75AQ8NAA5 344 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 HOXB13Q92826 284 aaPredicted RBP8.28□□□□□ -1.08
NUP50-214ENST00000469163 C20orf78Q9BR46 151 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 AGMATQ9BSE5 352 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 OR10A2Q9H208 303 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 ZNF442Q9H7R0 627 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 ENY2Q9NPA8 101 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 SPENQ96T58 3664 aaKnown RBP8.28□□□□□ -1.08
NUP50-214ENST00000469163 TRAV38-1A0A0B4J264 116 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 A0A1W2PPM0 123 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 SPRY3O43610 288 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 OR3A4PP47883 348 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 FXYD4P59646 89 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 MALLQ13021 153 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 GGTLC2Q14390 218 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 TIGITQ495A1 244 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 ARPC1AQ92747 370 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 RDH5Q92781 318 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 COMMD5Q9GZQ3 224 aa8.28□□□□□ -1.08
NUP50-214ENST00000469163 CFAP46Q8IYW2 2715 aa8.27□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms