RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 HINT2Q9BX68 163 aa13.64□□□□□ -0.23
CCDC188-201ENST00000439765 ANKRD34BA5PLL1 514 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 NPIPB5A8MRT5 1133 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 MED6O75586 246 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 CCNKO75909 580 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 POLR2GP62487 172 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC188-201ENST00000439765 RAB32Q13637 225 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 OR10W1Q8NGF6 305 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 PPP1R1CQ8WVI7 109 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 MAGT1Q9H0U3 335 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 RBKSQ9H477 322 aa13.63□□□□□ -0.23
CCDC188-201ENST00000439765 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
CCDC188-201ENST00000439765 IGLC7A0M8Q6 106 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 LINC01619G3V211 115 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 K7EPK0 472 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 SYNGR2O43760 224 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 OR2J3O76001 311 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 BRI3O95415 125 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 PSMB6P28072 239 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 SPINK9Q5DT21 86 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 ST6GAL2Q96JF0 529 aa13.62□□□□□ -0.23
CCDC188-201ENST00000439765 LSM5Q9Y4Y9 91 aaKnown RBP13.62□□□□□ -0.23
CCDC188-201ENST00000439765 FAM223BA6NKX1 122 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 CEBPZOSA8MTT3 80 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 WRBO00258 174 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 DEFA4P12838 97 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 HOXD3P31249 432 aaPredicted RBP13.61□□□□□ -0.23
CCDC188-201ENST00000439765 EXOSC2Q13868 293 aaKnown RBP13.61□□□□□ -0.23
CCDC188-201ENST00000439765 LRRC37A5PQ49AS3 106 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 AKAP14Q86UN6 197 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 FAM223AQ8IWN6 122 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 USMG5Q96IX5 58 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 SRSF8Q9BRL6 282 aaKnown RBP13.61□□□□□ -0.23
CCDC188-201ENST00000439765 PLEKHA3Q9HB20 300 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 TRBV9A0A0B4J1U6 114 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 INS-IGF2F8WCM5 200 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 MPC2O95563 127 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 TRBV12-3P01733 135 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 HSPB1P04792 205 aaKnown RBP13.61□□□□□ -0.23
CCDC188-201ENST00000439765 CTRB1P17538 263 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 S100A10P60903 97 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 C15orf32Q32M92 178 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 CTRB2Q6GPI1 263 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 NECAP1Q8NC96 275 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 DTD1Q8TEA8 209 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 DCUN1D4Q92564 292 aa13.61□□□□□ -0.23
CCDC188-201ENST00000439765 MCRIP2Q9BUT9 160 aaKnown RBP13.61□□□□□ -0.23
CCDC188-201ENST00000439765 RCL1Q9Y2P8 373 aaKnown RBP13.61□□□□□ -0.23
CCDC188-201ENST00000439765 RLN2P04090 185 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 CRYGCP07315 174 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 HOXA1P49639 335 aaPredicted RBP13.6□□□□□ -0.23
CCDC188-201ENST00000439765 WT1-ASQ06250 92 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 EGFEM1PQ0D2K5 195 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 ZNF343Q6P1L6 599 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 OR2T35Q8NGX2 323 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 DLX4Q92988 240 aaPredicted RBP13.6□□□□□ -0.23
CCDC188-201ENST00000439765 NEURL2Q9BR09 285 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 ENY2Q9NPA8 101 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 S4R3C0 116 aa13.6□□□□□ -0.23
CCDC188-201ENST00000439765 SEC14L6B5MCN3 397 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 H0YIZ8 118 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 SSSCA1O60232 199 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 DEDDO75618 318 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 OR13C7P0DN81 318 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 IAPPP10997 89 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 ERHP84090 104 aaKnown RBP13.59□□□□□ -0.23
CCDC188-201ENST00000439765 ATP5G2Q06055 141 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 FGL1Q08830 312 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 Q5BKY6 102 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 HSD17B13Q7Z5P4 300 aaPredicted RBP13.59□□□□□ -0.23
CCDC188-201ENST00000439765 FANCD2OSQ96PS1 177 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 CIB3Q96Q77 187 aaPredicted RBP13.59□□□□□ -0.23
CCDC188-201ENST00000439765 RAB40CQ96S21 281 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 RNF126Q9BV68 326 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 GPR61Q9BZJ8 451 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 HIPK2Q9H2X6 1198 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 C11orf1Q9H5F2 150 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 HEYLQ9NQ87 328 aaPredicted RBP13.59□□□□□ -0.23
CCDC188-201ENST00000439765 FBXL7Q9UJT9 491 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 SORL1Q92673 2214 aa13.59□□□□□ -0.23
CCDC188-201ENST00000439765 COL7A1Q02388 2944 aa13.58□□□□□ -0.23
CCDC188-201ENST00000439765 IGLV11-55A0A075B6I3 123 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 OVOL1O14753 267 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 LY86O95711 162 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 PET100P0DJ07 73 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 PAX9P55771 341 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 C11orf87Q6NUJ2 197 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 TCTE3Q8IZS6 198 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 OR2C3Q8N628 320 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 SMIM8Q96KF7 97 aa13.58□□□□□ -0.24
CCDC188-201ENST00000439765 PEF1Q9UBV8 284 aaKnown RBP13.58□□□□□ -0.24
CCDC188-201ENST00000439765 G3V3Q6 166 aa13.57□□□□□ -0.24
CCDC188-201ENST00000439765 SMLR1H3BR10 107 aa13.57□□□□□ -0.24
CCDC188-201ENST00000439765 K7EIL1 84 aa13.57□□□□□ -0.24
CCDC188-201ENST00000439765 NDUFB8O95169 186 aa13.57□□□□□ -0.24
CCDC188-201ENST00000439765 TMEM50AO95807 157 aa13.57□□□□□ -0.24
CCDC188-201ENST00000439765 IGHV3-23P01764 117 aa13.57□□□□□ -0.24
CCDC188-201ENST00000439765 PVALBP20472 110 aaPredicted RBP13.57□□□□□ -0.24
CCDC188-201ENST00000439765 PRSS54Q6PEW0 395 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms