RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 CEBPZOSA8MTT3 80 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 I3L2K1 104 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 CORTO00230 105 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 WIPF1O43516 503 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 TRBV12-3P01733 135 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 HOXD3P31249 432 aaPredicted RBP13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 FCGR2BP31994 310 aaPredicted RBP13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 SLURP1P55000 103 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 ATP5IP56385 69 aaPredicted RBP13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 C2orf83Q53S99 150 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 PLET1Q6UQ28 207 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 SCARB1Q8WTV0 552 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 DCUN1D4Q92564 292 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 DLX4Q92988 240 aaPredicted RBP13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 HIPK2Q9H2X6 1198 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 U3KQ87 197 aa13.46□□□□□ -0.25
COMMD3-BMI1-201ENST00000417470 BMPR1BO00238 502 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 OVOL1O14753 267 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 PRAF2O60831 178 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 MED6O75586 246 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 ADAP1O75689 374 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 LY86O95711 162 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 IGLL1P15814 213 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 KPRPQ5T749 579 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 NOXA1Q86UR1 476 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 TXN2Q99757 166 aa13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 HEYLQ9NQ87 328 aaPredicted RBP13.45□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 INMT-MINDY4F8WBC2 141 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 GGCTO75223 188 aaKnown RBP13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 CLEC3BP05452 202 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 ID3Q02535 119 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 TATDN3Q17R31 274 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 CLEC19AQ6UXS0 136 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 C12orf45Q8N5I9 185 aaPredicted RBP13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 DTD1Q8TEA8 209 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 SEC22CQ9BRL7 303 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 RBKSQ9H477 322 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 GAR1Q9NY12 217 aaKnown RBP13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 C21orf62Q9NYP8 219 aa13.44□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 SNRPGP15A8MWD9 76 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 INSL3P51460 131 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 RPEL1Q2QD12 228 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 OXLD1Q5BKU9 147 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 GPHB5Q86YW7 130 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 SLC24A4Q8NFF2 622 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 OR4D5Q8NGN0 318 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 MISP3Q96FF7 219 aa13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 BSCL2Q96G97 398 aaPredicted RBP13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 GPN1Q9HCN4 374 aaPredicted RBP13.43□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 MPTX1A8MV57 137 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 F8W735 103 aaPredicted RBP13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 G3V4G9 280 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 PTTG1O95997 202 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 MT-CO2P00403 227 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 IGHV3-23P01764 117 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 ARL3P36405 182 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 MFAP4P55083 255 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 C9orf66Q5T8R8 295 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 ACSM6Q6P461 480 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 SPSB3Q6PJ21 355 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 RNASEH2CQ8TDP1 164 aaKnown RBP13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 CIB3Q96Q77 187 aaPredicted RBP13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 NOTCH1P46531 2555 aa13.42□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 LGALS9O00182 355 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 TGOLN2O43493 480 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 SYNGR2O43760 224 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 NXPH3O95157 252 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 BEAN1Q3B7T3 259 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 C1QL4Q86Z23 238 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 TMEM170AQ8WVE7 144 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 OR10C1Q96KK4 312 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 SIGLEC8Q9NYZ4 499 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 S4R3C0 116 aa13.41□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 DNAH3Q8TD57 4116 aa13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 SEC14L6B5MCN3 397 aa13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 PPP5D1E7EU14 171 aa13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 NPY1RP25929 384 aa13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 NKX2-1P43699 371 aaPredicted RBP13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 EGFEM1PQ0D2K5 195 aa13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 IAH1Q2TAA2 248 aaPredicted RBP13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 ZBTB8BQ8NAP8 495 aaPredicted RBP13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 OR9G4Q8NGQ1 327 aa13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 PINX1Q96BK5 328 aaKnown RBP13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 ELOVL1Q9BW60 279 aa13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 ZMAT5Q9UDW3 170 aaKnown RBP13.4□□□□□ -0.26
COMMD3-BMI1-201ENST00000417470 RPS10-NUDT3A0A1W2PQS6 291 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 OR2C1O95371 312 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 IFNA10P01566 189 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 GPR183P32249 361 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 NPBWR1P48145 328 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 SYNJ2BPP57105 145 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 FAM106AQ4KMX7 169 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 REC114Q7Z4M0 266 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 ZNF436Q9C0F3 470 aaPredicted RBP13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 FNDC4Q9H6D8 234 aaPredicted RBP13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 PEMTQ9UBM1 199 aa13.39□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 IGHV3-21A0A0B4J1V1 117 aa13.38□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 CTSGP08311 255 aa13.38□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 SLC25A4P12235 298 aa13.38□□□□□ -0.27
COMMD3-BMI1-201ENST00000417470 RPP30P78346 268 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms