RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 ATP5IP56385 69 aaPredicted RBP12.67□□□□□ -0.38
LINC00398-201ENST00000414407 C12orf45Q8N5I9 185 aaPredicted RBP12.67□□□□□ -0.38
LINC00398-201ENST00000414407 DTD1Q8TEA8 209 aa12.67□□□□□ -0.38
LINC00398-201ENST00000414407 SEC22CQ9BRL7 303 aa12.67□□□□□ -0.38
LINC00398-201ENST00000414407 GPR61Q9BZJ8 451 aa12.67□□□□□ -0.38
LINC00398-201ENST00000414407 GPN1Q9HCN4 374 aaPredicted RBP12.67□□□□□ -0.38
LINC00398-201ENST00000414407 U3KQ87 197 aa12.67□□□□□ -0.38
LINC00398-201ENST00000414407 I3L2K1 104 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 K7EIM0 57 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 MED6O75586 246 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 LY86O95711 162 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 PTTG1O95997 202 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 TRBV12-3P01733 135 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 SLURP1P55000 103 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 KLF5Q13887 457 aaPredicted RBP12.66□□□□□ -0.38
LINC00398-201ENST00000414407 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 SCARB1Q8WTV0 552 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 DCUN1D4Q92564 292 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 DLX4Q92988 240 aaPredicted RBP12.66□□□□□ -0.38
LINC00398-201ENST00000414407 RBKSQ9H477 322 aa12.66□□□□□ -0.38
LINC00398-201ENST00000414407 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 BMPR1BO00238 502 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 OVOL1O14753 267 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 GGCTO75223 188 aaKnown RBP12.65□□□□□ -0.38
LINC00398-201ENST00000414407 CLEC3BP05452 202 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 IGLL1P15814 213 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 FCGR2BP31994 310 aaPredicted RBP12.65□□□□□ -0.38
LINC00398-201ENST00000414407 ID3Q02535 119 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 TATDN3Q17R31 274 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 RPEL1Q2QD12 228 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 SAMD5Q5TGI4 173 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 CLEC19AQ6UXS0 136 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 SLC24A4Q8NFF2 622 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 MISP3Q96FF7 219 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 CIB3Q96Q77 187 aaPredicted RBP12.65□□□□□ -0.38
LINC00398-201ENST00000414407 TXN2Q99757 166 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 GAR1Q9NY12 217 aaKnown RBP12.65□□□□□ -0.38
LINC00398-201ENST00000414407 C21orf62Q9NYP8 219 aa12.65□□□□□ -0.38
LINC00398-201ENST00000414407 MPTX1A8MV57 137 aa12.64□□□□□ -0.39
LINC00398-201ENST00000414407 WIPF1O43516 503 aa12.64□□□□□ -0.39
LINC00398-201ENST00000414407 NXPH3O95157 252 aa12.64□□□□□ -0.39
LINC00398-201ENST00000414407 IGHV3-23P01764 117 aa12.64□□□□□ -0.39
LINC00398-201ENST00000414407 ARL3P36405 182 aa12.64□□□□□ -0.39
LINC00398-201ENST00000414407 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
LINC00398-201ENST00000414407 OR4D5Q8NGN0 318 aa12.64□□□□□ -0.39
LINC00398-201ENST00000414407 RNASEH2CQ8TDP1 164 aaKnown RBP12.64□□□□□ -0.39
LINC00398-201ENST00000414407 BSCL2Q96G97 398 aaPredicted RBP12.64□□□□□ -0.39
LINC00398-201ENST00000414407 S4R3C0 116 aa12.64□□□□□ -0.39
LINC00398-201ENST00000414407 SYNGR2O43760 224 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 MT-CO2P00403 227 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 NPY1RP25929 384 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 INSL3P51460 131 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 MFAP4P55083 255 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 DCTN2Q13561 401 aaKnown RBP12.63□□□□□ -0.39
LINC00398-201ENST00000414407 SPSB3Q6PJ21 355 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 C1QL4Q86Z23 238 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 PINX1Q96BK5 328 aaKnown RBP12.63□□□□□ -0.39
LINC00398-201ENST00000414407 OR10C1Q96KK4 312 aa12.63□□□□□ -0.39
LINC00398-201ENST00000414407 PPP5D1E7EU14 171 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 G3V4G9 280 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 TGOLN2O43493 480 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 IFNA10P01566 189 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 GPR183P32249 361 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 NKX2-1P43699 371 aaPredicted RBP12.62□□□□□ -0.39
LINC00398-201ENST00000414407 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 KPRPQ5T749 579 aaPredicted RBP12.62□□□□□ -0.39
LINC00398-201ENST00000414407 C9orf66Q5T8R8 295 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 ACSM6Q6P461 480 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 ZBTB8BQ8NAP8 495 aaPredicted RBP12.62□□□□□ -0.39
LINC00398-201ENST00000414407 UXS1Q8NBZ7 420 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 CMYA5Q8N3K9 4069 aa12.62□□□□□ -0.39
LINC00398-201ENST00000414407 IGHV3-21A0A0B4J1V1 117 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 RPS10-NUDT3A0A1W2PQS6 291 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 SEC14L6B5MCN3 397 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 F8W735 103 aaPredicted RBP12.61□□□□□ -0.39
LINC00398-201ENST00000414407 LGALS9O00182 355 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 NPBWR1P48145 328 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 SYNJ2BPP57105 145 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 RPP30P78346 268 aaKnown RBP12.61□□□□□ -0.39
LINC00398-201ENST00000414407 FAM106AQ4KMX7 169 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 OR9G4Q8NGQ1 327 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 TMEM170AQ8WVE7 144 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 ELOVL1Q9BW60 279 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 FBN3Q75N90 2809 aa12.61□□□□□ -0.39
LINC00398-201ENST00000414407 OR2T8A6NH00 312 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 OR2C1O95371 312 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 SLC25A4P12235 298 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 SPNP16150 400 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 OPRK1P41145 380 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 BEAN1Q3B7T3 259 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 Q56UQ5 140 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 ETFRF1Q6IPR1 90 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 C2orf50Q96LR7 162 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 MAGT1Q9H0U3 335 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 FNDC4Q9H6D8 234 aaPredicted RBP12.6□□□□□ -0.39
LINC00398-201ENST00000414407 SIGLEC8Q9NYZ4 499 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 GSKIPQ9P0R6 139 aa12.6□□□□□ -0.39
LINC00398-201ENST00000414407 PEMTQ9UBM1 199 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms