RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 SPEM1Q8N4L4 309 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 TNFRSF19Q9NS68 423 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 BPTFQ12830 3046 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 FAM90A9PA6NNJ1 464 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 RBPMS2Q6ZRY4 209 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 RND1Q92730 232 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 SNRNP40Q96DI7 357 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 NDFIP1Q9BT67 221 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 AHCTF1Q8WYP5 2266 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 CFHR1Q03591 330 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 SMAGPQ0VAQ4 97 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 NUP35Q8NFH5 326 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 SRSF12Q8WXF0 261 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 DNASE2BQ8WZ79 361 aa11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 NAA38Q9BRA0 125 aaKnown RBP11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 AKIRIN1Q9H9L7 192 aaPredicted RBP11.55□□□□□ -0.56
CLTCL1-201ENST00000412649 LEAP2Q969E1 77 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 ARHGAP21Q5T5U3 1957 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 SAA2-SAA4A0A096LPE2 208 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 DUTP33316 252 aaKnown RBP11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 MEOX1P50221 254 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 SSPNQ14714 243 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 TM4SF20Q53R12 229 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 CALYQ9NYX4 217 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 IGLV3-19P01714 112 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 TMEM186Q96B77 213 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 ZNF414Q96IQ9 312 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 GPR82Q96P67 336 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 DCTN5Q9BTE1 182 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 IFI27L2Q9H2X8 130 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 SVILO95425 2214 aa11.54□□□□□ -0.56
CLTCL1-201ENST00000412649 TMSB15BA0A087X1C1 80 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 A0A0G2JLM5 398 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 A0A0G2JMM0 328 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 A0A1W2PPB8 328 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 C15orf61A6NNL5 157 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 KIR3DP1A8MWS1 328 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 Q6P435 159 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 RBX1P62877 108 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 ACP7Q6ZNF0 438 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 Q6ZSR3 168 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 MTURNQ8N3F0 131 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 K7EN84 100 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 LYRM7Q5U5X0 104 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 INO80CQ6PI98 192 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 FER1L6-AS1Q8NA97 138 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 NPIPB3Q92617 1050 aa11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 NCOA6Q14686 2063 aaPredicted RBP11.53□□□□□ -0.56
CLTCL1-201ENST00000412649 TMEM238C9JI98 176 aa11.52□□□□□ -0.56
CLTCL1-201ENST00000412649 FOXF2Q12947 444 aa11.52□□□□□ -0.56
CLTCL1-201ENST00000412649 SLAQ13239 276 aa11.52□□□□□ -0.56
CLTCL1-201ENST00000412649 PRR31Q5SQ13 230 aa11.52□□□□□ -0.56
CLTCL1-201ENST00000412649 MOGAT3Q86VF5 341 aa11.52□□□□□ -0.56
CLTCL1-201ENST00000412649 OR4X2Q8NGF9 303 aa11.52□□□□□ -0.56
CLTCL1-201ENST00000412649 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 J3QW42 95 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 HSD52Q0P140 79 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 KLF14Q8TD94 323 aaPredicted RBP11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 CSTL1Q9H114 145 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 RALYQ9UKM9 306 aaKnown RBP11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 NUP210LQ5VU65 1888 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 LINC00473A8K010 186 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 H3BTX0 84 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 M0R1B8 84 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 GFRA3O60609 400 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 KLF7O75840 302 aaPredicted RBP11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 AGFG2O95081 481 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 GCSAMQ8N6F7 178 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 A0A1B0GUT8 65 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 C11orf52Q96A22 123 aa11.52□□□□□ -0.57
CLTCL1-201ENST00000412649 A0A1W2PQM1 296 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 TOMM40O96008 361 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 WNT2P09544 360 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 GNG5P63218 68 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 BVES-AS1Q5T3Y7 98 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 FAM71F2Q6NXP2 309 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 C17orf82Q86X59 251 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 TMEM116Q8NCL8 245 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 NDUFS8O00217 210 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 PYYP10082 97 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 ACP1P24666 158 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 RPS20P60866 119 aaKnown RBP11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 IMMP1LQ96LU5 166 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 PSPNO60542 156 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 CKS2P33552 79 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 LINC00205P59089 165 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 ZNF576Q9H609 170 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 HIGD1AQ9Y241 93 aa11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 PTPRZ1P23471 2315 aaPredicted RBP11.51□□□□□ -0.57
CLTCL1-201ENST00000412649 FAM231BA6NCW3 169 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 NBEAP1P0C6P0 100 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 ABCA7Q8IZY2 2146 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 TTTY12Q9BZ98 90 aa11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
CLTCL1-201ENST00000412649 SCGB1C2P0DMR2 95 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms